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Cluster: AG214_bin.48_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27912 k141_27912_15 15941 16279 - 4.A.3.1.2
TF k141_27912 k141_27912_16 16494 17498 - LacI
TC k141_27912 k141_27912_17 17856 19631 + 4.A.3.1.1
CAZyme k141_27912 k141_27912_18 19698 21137 + GH1
TF k141_27912 k141_27912_19 21414 22451 - LacI
CAZyme k141_27912 k141_27912_20 22793 24235 + GH1
TC k141_27912 k141_27912_21 24412 26172 + 4.A.3.1.1
TF k141_27912 k141_27912_22 26510 27520 - LacI
TC k141_27912 k141_27912_23 27795 29573 + 4.A.3.1.1
CAZyme k141_27912 k141_27912_24 29650 31071 + GH1
STP k141_27912 k141_27912_25 31583 31978 - DeoRC
TC k141_27912 k141_27912_26 32141 33835 - 4.A.3.1.1
Gene ID: k141_27912_15
Type: TC
Location: 15941 - 16279 (-)
Gene ID: k141_27912_16
Type: TF
Location: 16494 - 17498 (-)
Gene ID: k141_27912_17
Type: TC
Location: 17856 - 19631 (+)
Gene ID: k141_27912_18
Type: CAZyme
Location: 19698 - 21137 (+)
Gene ID: k141_27912_19
Type: TF
Location: 21414 - 22451 (-)
Gene ID: k141_27912_20
Type: CAZyme
Location: 22793 - 24235 (+)
Gene ID: k141_27912_21
Type: TC
Location: 24412 - 26172 (+)
Gene ID: k141_27912_22
Type: TF
Location: 26510 - 27520 (-)
Gene ID: k141_27912_23
Type: TC
Location: 27795 - 29573 (+)
Gene ID: k141_27912_24
Type: CAZyme
Location: 29650 - 31071 (+)
Gene ID: k141_27912_25
Type: STP
Location: 31583 - 31978 (-)
Gene ID: k141_27912_26
Type: TC
Location: 32141 - 33835 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_27912_19 vegetarian > omnivore 1.04031 0.02677

🧭 Explore Read Mapping of CGC

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