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Cluster: AG204_43_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_152856 k141_152856_9 7898 8677 - 3.A.1.5.18
TC k141_152856 k141_152856_10 8674 9357 - 3.A.1.5.9
TC k141_152856 k141_152856_11 9354 10175 - 3.A.1.5.6
TC k141_152856 k141_152856_12 10165 11136 - 3.A.1.5.20
STP k141_152856 k141_152856_13 11249 12814 - SBP_bac_5
NULL(UNKNOWN) k141_152856 k141_152856_14 12856 13608 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_152856 k141_152856_15 14361 14846 + 4.A.1.2.6
TC k141_152856 k141_152856_16 14859 16472 + 8.A.7.1.1
STP k141_152856 k141_152856_17 16525 16782 + PTS-HPr
TC k141_152856 k141_152856_18 16870 18366 + 4.A.1.1.7
CAZyme k141_152856 k141_152856_19 18916 21939 + GH3
NULL(UNKNOWN) k141_152856 k141_152856_20 21956 22342 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_152856 k141_152856_21 22538 24922 + GH2
pfam k141_152856 k141_152856_22 24999 25184 - DUF6440
pfam k141_152856 k141_152856_23 25442 26461 - YhcG_C | DUF1016_N | HTH_ParB
TC k141_152856 k141_152856_24 26632 27546 - 8.A.21.2.2
Gene ID: k141_152856_9
Type: TC
Location: 7898 - 8677 (-)
Gene ID: k141_152856_10
Type: TC
Location: 8674 - 9357 (-)
Gene ID: k141_152856_11
Type: TC
Location: 9354 - 10175 (-)
Gene ID: k141_152856_12
Type: TC
Location: 10165 - 11136 (-)
Gene ID: k141_152856_13
Type: STP
Location: 11249 - 12814 (-)
Gene ID: k141_152856_14
Type:
Location: 12856 - 13608 (-)
Gene ID: k141_152856_15
Type: TC
Location: 14361 - 14846 (+)
Gene ID: k141_152856_16
Type: TC
Location: 14859 - 16472 (+)
Gene ID: k141_152856_17
Type: STP
Location: 16525 - 16782 (+)
Gene ID: k141_152856_18
Type: TC
Location: 16870 - 18366 (+)
Gene ID: k141_152856_19
Type: CAZyme
Location: 18916 - 21939 (+)
Gene ID: k141_152856_20
Type:
Location: 21956 - 22342 (+)
Gene ID: k141_152856_21
Type: CAZyme
Location: 22538 - 24922 (+)
Gene ID: k141_152856_22
Type: pfam
Location: 24999 - 25184 (-)
Gene ID: k141_152856_23
Type: pfam
Location: 25442 - 26461 (-)
Gene ID: k141_152856_24
Type: TC
Location: 26632 - 27546 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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