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Cluster: AG204_43_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_95320 k141_95320_8 9598 12042 + GH3
CAZyme k141_95320 k141_95320_9 12137 15184 + GH3
TC k141_95320 k141_95320_10 15748 17160 + 5.A.1.6.1
pfam k141_95320 k141_95320_11 17174 17638 + FtrD-like
TC k141_95320 k141_95320_12 17853 18779 + 2.A.19.5.2
CAZyme k141_95320 k141_95320_13 18905 20638 - CBM34 | GH13_20
TC k141_95320 k141_95320_14 20642 21973 - 2.A.66.1.28
TF k141_95320 k141_95320_15 22109 22960 + HTH_AraC | HTH_AraC
TC k141_95320 k141_95320_16 23014 24528 - 2.A.66.1.40
pfam k141_95320 k141_95320_17 24532 25476 - PS_pyruv_trans
CAZyme k141_95320 k141_95320_18 25610 26641 - GT2
NULL(UNKNOWN) k141_95320 k141_95320_19 26673 27989 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_95320 k141_95320_20 28002 29186 - GT4
pfam k141_95320 k141_95320_21 29442 30569 - Glycos_transf_1 | Glyco_trans_4_4 | Glyco_trans_1_4
TC k141_95320 k141_95320_22 30728 32488 - 8.A.59.2.1
pfam k141_95320 k141_95320_23 32734 33546 + CBM9_1
TC k141_95320 k141_95320_24 33562 34929 + 3.A.1.1.30
CAZyme k141_95320 k141_95320_25 34919 36898 + GH3
TC k141_95320 k141_95320_26 36962 37993 + 3.A.1.1.30
TC k141_95320 k141_95320_27 37996 38889 + 3.A.1.1.24
CAZyme k141_95320 k141_95320_28 38913 40799 + GH3
TC k141_95320 k141_95320_29 40824 41933 + 3.A.1.1.16
CAZyme k141_95320 k141_95320_30 42121 45507 + GH2
NULL(UNKNOWN) k141_95320 k141_95320_31 45713 46375 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_95320 k141_95320_32 46549 46962 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_95320 k141_95320_33 47493 50477 + GH3
TC k141_95320 k141_95320_34 50816 52789 + 3.D.6.1.2
Gene ID: k141_95320_8
Type: CAZyme
Location: 9598 - 12042 (+)
Gene ID: k141_95320_9
Type: CAZyme
Location: 12137 - 15184 (+)
Gene ID: k141_95320_10
Type: TC
Location: 15748 - 17160 (+)
Gene ID: k141_95320_11
Type: pfam
Location: 17174 - 17638 (+)
Gene ID: k141_95320_12
Type: TC
Location: 17853 - 18779 (+)
Gene ID: k141_95320_13
Type: CAZyme
Location: 18905 - 20638 (-)
Gene ID: k141_95320_14
Type: TC
Location: 20642 - 21973 (-)
Gene ID: k141_95320_15
Type: TF
Location: 22109 - 22960 (+)
Gene ID: k141_95320_16
Type: TC
Location: 23014 - 24528 (-)
Gene ID: k141_95320_17
Type: pfam
Location: 24532 - 25476 (-)
Gene ID: k141_95320_18
Type: CAZyme
Location: 25610 - 26641 (-)
Gene ID: k141_95320_19
Type:
Location: 26673 - 27989 (-)
Gene ID: k141_95320_20
Type: CAZyme
Location: 28002 - 29186 (-)
Gene ID: k141_95320_21
Type: pfam
Location: 29442 - 30569 (-)
Gene ID: k141_95320_22
Type: TC
Location: 30728 - 32488 (-)
Gene ID: k141_95320_23
Type: pfam
Location: 32734 - 33546 (+)
Gene ID: k141_95320_24
Type: TC
Location: 33562 - 34929 (+)
Gene ID: k141_95320_25
Type: CAZyme
Location: 34919 - 36898 (+)
Gene ID: k141_95320_26
Type: TC
Location: 36962 - 37993 (+)
Gene ID: k141_95320_27
Type: TC
Location: 37996 - 38889 (+)
Gene ID: k141_95320_28
Type: CAZyme
Location: 38913 - 40799 (+)
Gene ID: k141_95320_29
Type: TC
Location: 40824 - 41933 (+)
Gene ID: k141_95320_30
Type: CAZyme
Location: 42121 - 45507 (+)
Gene ID: k141_95320_31
Type:
Location: 45713 - 46375 (-)
Gene ID: k141_95320_32
Type:
Location: 46549 - 46962 (-)
Gene ID: k141_95320_33
Type: CAZyme
Location: 47493 - 50477 (+)
Gene ID: k141_95320_34
Type: TC
Location: 50816 - 52789 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_95320_23 vegetarian > omnivore 1.23260 0.02314
k141_95320_26 vegetarian > omnivore 1.03101 0.02314
k141_95320_27 vegetarian > omnivore 1.10416 0.02314
k141_95320_27 vegetarian > vegan 1.01620 0.00566

🧭 Explore Read Mapping of CGC

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