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Cluster: AG204_43_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_220122 k141_220122_7 8883 11246 - GH3
CAZyme k141_220122 k141_220122_8 11277 14384 - GH38
TC k141_220122 k141_220122_9 14600 16408 + 8.A.59.2.1
TF k141_220122 k141_220122_10 16386 18017 + HTH_AraC
STP k141_220122 k141_220122_11 18115 19785 - SBP_bac_1
TC k141_220122 k141_220122_12 20261 21187 + 3.A.1.1.9
TC k141_220122 k141_220122_13 21274 22185 + 3.A.1.1.9
pfam k141_220122 k141_220122_14 22190 22744 + CBM9_2
CAZyme k141_220122 k141_220122_15 22802 25267 + GH89
Gene ID: k141_220122_7
Type: CAZyme
Location: 8883 - 11246 (-)
Gene ID: k141_220122_8
Type: CAZyme
Location: 11277 - 14384 (-)
Gene ID: k141_220122_9
Type: TC
Location: 14600 - 16408 (+)
Gene ID: k141_220122_10
Type: TF
Location: 16386 - 18017 (+)
Gene ID: k141_220122_11
Type: STP
Location: 18115 - 19785 (-)
Gene ID: k141_220122_12
Type: TC
Location: 20261 - 21187 (+)
Gene ID: k141_220122_13
Type: TC
Location: 21274 - 22185 (+)
Gene ID: k141_220122_14
Type: pfam
Location: 22190 - 22744 (+)
Gene ID: k141_220122_15
Type: CAZyme
Location: 22802 - 25267 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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