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Cluster: AG202_95_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_214600 k141_214600_66 76284 78299 + 3.A.3.6.10
TC k141_214600 k141_214600_67 78379 79758 - 2.A.66.1.13
CAZyme k141_214600 k141_214600_68 80142 82040 + GH20
TC k141_214600 k141_214600_69 82146 83498 + 2.A.66.1.45
pfam k141_214600 k141_214600_70 83575 85818 + ABC_tran
TC k141_214600 k141_214600_71 86226 87899 + 3.A.1.5.3
TC k141_214600 k141_214600_72 87987 88955 + 3.A.1.5.11
TC k141_214600 k141_214600_73 88945 89862 + 3.A.1.5.20
TC k141_214600 k141_214600_74 89875 90906 + 3.A.1.5.25
TC k141_214600 k141_214600_75 90896 91873 + 3.A.1.5.20
Gene ID: k141_214600_66
Type: TC
Location: 76284 - 78299 (+)
Gene ID: k141_214600_67
Type: TC
Location: 78379 - 79758 (-)
Gene ID: k141_214600_68
Type: CAZyme
Location: 80142 - 82040 (+)
Gene ID: k141_214600_69
Type: TC
Location: 82146 - 83498 (+)
Gene ID: k141_214600_70
Type: pfam
Location: 83575 - 85818 (+)
Gene ID: k141_214600_71
Type: TC
Location: 86226 - 87899 (+)
Gene ID: k141_214600_72
Type: TC
Location: 87987 - 88955 (+)
Gene ID: k141_214600_73
Type: TC
Location: 88945 - 89862 (+)
Gene ID: k141_214600_74
Type: TC
Location: 89875 - 90906 (+)
Gene ID: k141_214600_75
Type: TC
Location: 90896 - 91873 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_214600_72 omnivore > vegetarian 2.76458 0.04104

🧭 Explore Read Mapping of CGC

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