dbCAN Logo

Cluster: AG199_42_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_273296 k141_273296_8 10117 11499 - GH4
TC k141_273296 k141_273296_9 11503 13119 - 4.A.1.1.3
pfam k141_273296 k141_273296_10 13219 14073 - PRD | PRD | CAT_RBD
TC k141_273296 k141_273296_11 14092 14604 - 4.A.1.2.2
STP k141_273296 k141_273296_12 14885 15646 - Fer4
TC k141_273296 k141_273296_13 16268 18517 - 1.I.1.1.3
STP k141_273296 k141_273296_14 19097 20059 + FHA
STP k141_273296 k141_273296_15 20231 22315 + Pkinase
TC k141_273296 k141_273296_16 22647 24989 + 3.A.3.5.15
Gene ID: k141_273296_8
Type: CAZyme
Location: 10117 - 11499 (-)
Gene ID: k141_273296_9
Type: TC
Location: 11503 - 13119 (-)
Gene ID: k141_273296_10
Type: pfam
Location: 13219 - 14073 (-)
Gene ID: k141_273296_11
Type: TC
Location: 14092 - 14604 (-)
Gene ID: k141_273296_12
Type: STP
Location: 14885 - 15646 (-)
Gene ID: k141_273296_13
Type: TC
Location: 16268 - 18517 (-)
Gene ID: k141_273296_14
Type: STP
Location: 19097 - 20059 (+)
Gene ID: k141_273296_15
Type: STP
Location: 20231 - 22315 (+)
Gene ID: k141_273296_16
Type: TC
Location: 22647 - 24989 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List