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Cluster: AG188_bin.44_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_261385 k141_261385_3 1757 3304 - GH3
CAZyme k141_261385 k141_261385_4 3326 4516 - GH27
CAZyme k141_261385 k141_261385_5 4539 5675 - GH63
TC k141_261385 k141_261385_6 5697 7418 - 8.A.59.2.1
TF k141_261385 k141_261385_7 7443 8918 - HTH_AraC
TC k141_261385 k141_261385_8 9353 10264 - 3.A.1.1.29
TC k141_261385 k141_261385_9 10278 11237 - 3.A.1.1.10
TC k141_261385 k141_261385_10 11309 12952 - 3.A.1.1.9
CAZyme k141_261385 k141_261385_11 12982 16830 - GH10
Gene ID: k141_261385_3
Type: CAZyme
Location: 1757 - 3304 (-)
Gene ID: k141_261385_4
Type: CAZyme
Location: 3326 - 4516 (-)
Gene ID: k141_261385_5
Type: CAZyme
Location: 4539 - 5675 (-)
Gene ID: k141_261385_6
Type: TC
Location: 5697 - 7418 (-)
Gene ID: k141_261385_7
Type: TF
Location: 7443 - 8918 (-)
Gene ID: k141_261385_8
Type: TC
Location: 9353 - 10264 (-)
Gene ID: k141_261385_9
Type: TC
Location: 10278 - 11237 (-)
Gene ID: k141_261385_10
Type: TC
Location: 11309 - 12952 (-)
Gene ID: k141_261385_11
Type: CAZyme
Location: 12982 - 16830 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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