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Cluster: AG188_bin.44_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1480 k141_1480_206 233615 235366 + 2.A.58.2.2
pfam k141_1480 k141_1480_207 235546 236409 - Sugar_transport
CAZyme k141_1480 k141_1480_208 236409 237500 - GH5_37
TF k141_1480 k141_1480_209 237641 238375 + HTH_AraC
TC k141_1480 k141_1480_210 238428 239201 - 3.A.1.34.1
TC k141_1480 k141_1480_211 239215 240078 - 3.A.1.34.1
pfam k141_1480 k141_1480_212 240169 241185 - ABC_sub_bind
CAZyme k141_1480 k141_1480_213 241563 242906 - GH180
Gene ID: k141_1480_206
Type: TC
Location: 233615 - 235366 (+)
Gene ID: k141_1480_207
Type: pfam
Location: 235546 - 236409 (-)
Gene ID: k141_1480_208
Type: CAZyme
Location: 236409 - 237500 (-)
Gene ID: k141_1480_209
Type: TF
Location: 237641 - 238375 (+)
Gene ID: k141_1480_210
Type: TC
Location: 238428 - 239201 (-)
Gene ID: k141_1480_211
Type: TC
Location: 239215 - 240078 (-)
Gene ID: k141_1480_212
Type: pfam
Location: 240169 - 241185 (-)
Gene ID: k141_1480_213
Type: CAZyme
Location: 241563 - 242906 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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