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Cluster: AG188_bin.44_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_202650 k141_202650_30 33829 37218 - GH10
pfam k141_202650 k141_202650_31 37341 39989 - SLH
pfam k141_202650 k141_202650_32 39993 43184 - SLH | SLH | SLH
CAZyme k141_202650 k141_202650_33 43206 45848 - CBM9 | GH10
TC k141_202650 k141_202650_34 46010 47620 - 3.A.1.1.29
TC k141_202650 k141_202650_35 47656 48573 - 3.A.1.1.29
TC k141_202650 k141_202650_36 48592 49554 - 3.A.1.1.10
STP k141_202650 k141_202650_37 49751 51487 - HATPase_c
TF k141_202650 k141_202650_38 51450 52586 - HTH_AraC | HTH_AraC
CAZyme k141_202650 k141_202650_39 52745 54901 - GH36
pfam k141_202650 k141_202650_40 54915 56009 - Metallophos
TC k141_202650 k141_202650_41 56269 57120 - 3.A.1.1.47
TC k141_202650 k141_202650_42 57130 58077 - 3.A.1.1.4
Gene ID: k141_202650_30
Type: CAZyme
Location: 33829 - 37218 (-)
Gene ID: k141_202650_31
Type: pfam
Location: 37341 - 39989 (-)
Gene ID: k141_202650_32
Type: pfam
Location: 39993 - 43184 (-)
Gene ID: k141_202650_33
Type: CAZyme
Location: 43206 - 45848 (-)
Gene ID: k141_202650_34
Type: TC
Location: 46010 - 47620 (-)
Gene ID: k141_202650_35
Type: TC
Location: 47656 - 48573 (-)
Gene ID: k141_202650_36
Type: TC
Location: 48592 - 49554 (-)
Gene ID: k141_202650_37
Type: STP
Location: 49751 - 51487 (-)
Gene ID: k141_202650_38
Type: TF
Location: 51450 - 52586 (-)
Gene ID: k141_202650_39
Type: CAZyme
Location: 52745 - 54901 (-)
Gene ID: k141_202650_40
Type: pfam
Location: 54915 - 56009 (-)
Gene ID: k141_202650_41
Type: TC
Location: 56269 - 57120 (-)
Gene ID: k141_202650_42
Type: TC
Location: 57130 - 58077 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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