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Cluster: AG188_bin.44_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_302423 k141_302423_22 21123 23159 + 1.C.39.4.5
pfam k141_302423 k141_302423_23 23159 24085 + PseudoU_synth_2 | S4
pfam k141_302423 k141_302423_24 24099 27722 + UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C
CAZyme k141_302423 k141_302423_25 27799 28908 + GT28
STP k141_302423 k141_302423_26 28937 29161 + FeoA
TC k141_302423 k141_302423_27 29161 31278 + 9.A.8.1.6
Gene ID: k141_302423_22
Type: TC
Location: 21123 - 23159 (+)
Gene ID: k141_302423_23
Type: pfam
Location: 23159 - 24085 (+)
Gene ID: k141_302423_24
Type: pfam
Location: 24099 - 27722 (+)
Gene ID: k141_302423_25
Type: CAZyme
Location: 27799 - 28908 (+)
Gene ID: k141_302423_26
Type: STP
Location: 28937 - 29161 (+)
Gene ID: k141_302423_27
Type: TC
Location: 29161 - 31278 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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