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Cluster: AG156_12_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72093 k141_72093_11 12343 12858 - 3.A.1.26.5
CAZyme k141_72093 k141_72093_12 13682 16117 - GH94
TF k141_72093 k141_72093_13 16644 17651 + LacI
pfam k141_72093 k141_72093_14 17730 19175 + TAT_signal
TC k141_72093 k141_72093_15 19273 20250 + 3.A.1.1.4
TC k141_72093 k141_72093_16 20253 21119 + 3.A.1.1.48
pfam k141_72093 k141_72093_17 21322 21732 - Pep_deformylase
TC k141_72093 k141_72093_18 21746 23026 - 2.A.26.1.2
pfam k141_72093 k141_72093_19 23238 24008 + BPD_transp_1
TC k141_72093 k141_72093_20 24002 24586 + 3.A.1.19.1
TC k141_72093 k141_72093_21 24751 25968 - 2.A.103.1.7
Gene ID: k141_72093_11
Type: TC
Location: 12343 - 12858 (-)
Gene ID: k141_72093_12
Type: CAZyme
Location: 13682 - 16117 (-)
Gene ID: k141_72093_13
Type: TF
Location: 16644 - 17651 (+)
Gene ID: k141_72093_14
Type: pfam
Location: 17730 - 19175 (+)
Gene ID: k141_72093_15
Type: TC
Location: 19273 - 20250 (+)
Gene ID: k141_72093_16
Type: TC
Location: 20253 - 21119 (+)
Gene ID: k141_72093_17
Type: pfam
Location: 21322 - 21732 (-)
Gene ID: k141_72093_18
Type: TC
Location: 21746 - 23026 (-)
Gene ID: k141_72093_19
Type: pfam
Location: 23238 - 24008 (+)
Gene ID: k141_72093_20
Type: TC
Location: 24002 - 24586 (+)
Gene ID: k141_72093_21
Type: TC
Location: 24751 - 25968 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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