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Cluster: AG156_12_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_322347 k141_322347_26 26902 27783 - 3.A.1.148.3
NULL(UNKNOWN) k141_322347 k141_322347_27 27796 28527 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_322347 k141_322347_28 28524 29066 - Sigma70_r2 | Sigma70_r4_2
TC k141_322347 k141_322347_29 29467 30843 + 2.A.66.1.33
CAZyme k141_322347 k141_322347_30 30932 33448 - GH31_2
CAZyme k141_322347 k141_322347_31 33470 35965 - GH31_2
TC k141_322347 k141_322347_32 36085 37404 - 2.A.56.1.5
TC k141_322347 k141_322347_33 37404 37892 - 2.A.56.1.5
TC k141_322347 k141_322347_34 37994 39028 - 2.A.56.1.5
Gene ID: k141_322347_26
Type: TC
Location: 26902 - 27783 (-)
Gene ID: k141_322347_27
Type:
Location: 27796 - 28527 (-)
Gene ID: k141_322347_28
Type: STP
Location: 28524 - 29066 (-)
Gene ID: k141_322347_29
Type: TC
Location: 29467 - 30843 (+)
Gene ID: k141_322347_30
Type: CAZyme
Location: 30932 - 33448 (-)
Gene ID: k141_322347_31
Type: CAZyme
Location: 33470 - 35965 (-)
Gene ID: k141_322347_32
Type: TC
Location: 36085 - 37404 (-)
Gene ID: k141_322347_33
Type: TC
Location: 37404 - 37892 (-)
Gene ID: k141_322347_34
Type: TC
Location: 37994 - 39028 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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