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Cluster: AG156_12_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_243597 k141_243597_13 15057 16853 - PL33_1
TF k141_243597 k141_243597_14 16868 18130 - HTH_AraC | HTH_AraC
TC k141_243597 k141_243597_15 18105 19922 - 8.A.59.2.1
STP k141_243597 k141_243597_16 20267 21586 + SBP_bac_1
TC k141_243597 k141_243597_17 21764 22690 + 3.A.1.1.20
TC k141_243597 k141_243597_18 22707 23567 + 3.A.1.1.11
CAZyme k141_243597 k141_243597_19 23641 25437 + GH2
CAZyme k141_243597 k141_243597_20 25443 26594 + GH88
Gene ID: k141_243597_13
Type: CAZyme
Location: 15057 - 16853 (-)
Gene ID: k141_243597_14
Type: TF
Location: 16868 - 18130 (-)
Gene ID: k141_243597_15
Type: TC
Location: 18105 - 19922 (-)
Gene ID: k141_243597_16
Type: STP
Location: 20267 - 21586 (+)
Gene ID: k141_243597_17
Type: TC
Location: 21764 - 22690 (+)
Gene ID: k141_243597_18
Type: TC
Location: 22707 - 23567 (+)
Gene ID: k141_243597_19
Type: CAZyme
Location: 23641 - 25437 (+)
Gene ID: k141_243597_20
Type: CAZyme
Location: 25443 - 26594 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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