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Cluster: AG148_39_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_95090 k141_95090_22 18893 19765 + 3.A.1.1.42
TC k141_95090 k141_95090_23 19765 20622 + 3.A.1.1.45
CAZyme k141_95090 k141_95090_24 20619 22664 + GH36
CAZyme k141_95090 k141_95090_25 22849 24192 - GH30_1
TF k141_95090 k141_95090_26 24225 26426 - HTH_AraC
CAZyme k141_95090 k141_95090_27 26488 27498 - GH5_45
STP k141_95090 k141_95090_28 27580 29076 - SBP_bac_1
TC k141_95090 k141_95090_29 29129 30022 - 3.A.1.1.29
TC k141_95090 k141_95090_30 30042 30995 - 3.A.1.1.10
CAZyme k141_95090 k141_95090_31 31294 33396 + GH3
Gene ID: k141_95090_22
Type: TC
Location: 18893 - 19765 (+)
Gene ID: k141_95090_23
Type: TC
Location: 19765 - 20622 (+)
Gene ID: k141_95090_24
Type: CAZyme
Location: 20619 - 22664 (+)
Gene ID: k141_95090_25
Type: CAZyme
Location: 22849 - 24192 (-)
Gene ID: k141_95090_26
Type: TF
Location: 24225 - 26426 (-)
Gene ID: k141_95090_27
Type: CAZyme
Location: 26488 - 27498 (-)
Gene ID: k141_95090_28
Type: STP
Location: 27580 - 29076 (-)
Gene ID: k141_95090_29
Type: TC
Location: 29129 - 30022 (-)
Gene ID: k141_95090_30
Type: TC
Location: 30042 - 30995 (-)
Gene ID: k141_95090_31
Type: CAZyme
Location: 31294 - 33396 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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