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Cluster: AG137_bin.21_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_122147 k141_122147_69 76994 79483 + GT2 | GT2
NULL(UNKNOWN) k141_122147 k141_122147_70 79515 79715 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_122147 k141_122147_71 79682 81658 + GT2
CAZyme k141_122147 k141_122147_72 81670 82626 + GT2
TC k141_122147 k141_122147_73 82774 84192 + 9.B.18.1.1
pfam k141_122147 k141_122147_74 84205 85308 + LytR_cpsA_psr
CAZyme k141_122147 k141_122147_75 85308 86279 + GT2
Gene ID: k141_122147_69
Type: CAZyme
Location: 76994 - 79483 (+)
Gene ID: k141_122147_70
Type:
Location: 79515 - 79715 (+)
Gene ID: k141_122147_71
Type: CAZyme
Location: 79682 - 81658 (+)
Gene ID: k141_122147_72
Type: CAZyme
Location: 81670 - 82626 (+)
Gene ID: k141_122147_73
Type: TC
Location: 82774 - 84192 (+)
Gene ID: k141_122147_74
Type: pfam
Location: 84205 - 85308 (+)
Gene ID: k141_122147_75
Type: CAZyme
Location: 85308 - 86279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_122147_69 vegetarian > omnivore 1.18687 0.00514
k141_122147_70 vegetarian > omnivore 2.61925 0.00514
k141_122147_70 vegan > omnivore 1.72369 0.02366
k141_122147_71 vegetarian > vegan 1.35564 0.00364
k141_122147_71 vegetarian > omnivore 1.86318 0.00514
k141_122147_72 vegetarian > omnivore 1.05961 0.00514
k141_122147_74 vegetarian > omnivore 1.62878 0.00514

🧭 Explore Read Mapping of CGC

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