Cluster: AG137_bin.21_CGC32
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: AG137_bin.21
- CGC Family ID: CGCFAM_01895
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_129738 | k141_129738_36 | 34782 | 36599 | - | 8.A.59.2.1 |
| pfam | k141_129738 | k141_129738_37 | 36618 | 38273 | - | SBP_bac_1 |
| TC | k141_129738 | k141_129738_38 | 38475 | 39308 | - | 3.A.1.1.20 |
| TC | k141_129738 | k141_129738_39 | 39311 | 40246 | - | 3.A.1.1.4 |
| STP | k141_129738 | k141_129738_40 | 40371 | 41798 | - | SBP_bac_1 |
| pfam | k141_129738 | k141_129738_41 | 41930 | 42229 | - | Glyco_hydro_30C |
| CAZyme | k141_129738 | k141_129738_42 | 42183 | 45320 | - | GH161 |
| CAZyme | k141_129738 | k141_129738_43 | 45334 | 48132 | - | GH94 |
| pfam | k141_129738 | k141_129738_44 | 48253 | 48591 | - | Imp-YgjV |
| TC | k141_129738 | k141_129738_45 | 48724 | 49311 | - | 2.A.115.2.14 |
| TC | k141_129738 | k141_129738_46 | 49325 | 50692 | - | 2.A.66.1.13 |
Gene ID: k141_129738_36
Type: TC
Location: 34782 - 36599 (-)
Type: TC
Location: 34782 - 36599 (-)
Gene ID: k141_129738_37
Type: pfam
Location: 36618 - 38273 (-)
Type: pfam
Location: 36618 - 38273 (-)
Gene ID: k141_129738_38
Type: TC
Location: 38475 - 39308 (-)
Type: TC
Location: 38475 - 39308 (-)
Gene ID: k141_129738_39
Type: TC
Location: 39311 - 40246 (-)
Type: TC
Location: 39311 - 40246 (-)
Gene ID: k141_129738_40
Type: STP
Location: 40371 - 41798 (-)
Type: STP
Location: 40371 - 41798 (-)
Gene ID: k141_129738_41
Type: pfam
Location: 41930 - 42229 (-)
Type: pfam
Location: 41930 - 42229 (-)
Gene ID: k141_129738_42
Type: CAZyme
Location: 42183 - 45320 (-)
Type: CAZyme
Location: 42183 - 45320 (-)
Gene ID: k141_129738_43
Type: CAZyme
Location: 45334 - 48132 (-)
Type: CAZyme
Location: 45334 - 48132 (-)
Gene ID: k141_129738_44
Type: pfam
Location: 48253 - 48591 (-)
Type: pfam
Location: 48253 - 48591 (-)
Gene ID: k141_129738_45
Type: TC
Location: 48724 - 49311 (-)
Type: TC
Location: 48724 - 49311 (-)
Gene ID: k141_129738_46
Type: TC
Location: 49325 - 50692 (-)
Type: TC
Location: 49325 - 50692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia rectibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_129738_38 | vegetarian > omnivore | 1.40840 | 0.00514 |
| k141_129738_38 | vegetarian > vegan | 1.91263 | 0.00364 |
| k141_129738_39 | vegetarian > omnivore | 1.21276 | 0.00514 |
| k141_129738_39 | vegetarian > vegan | 2.71820 | 0.00364 |
| k141_129738_40 | vegetarian > vegan | 2.09420 | 0.00364 |