Cluster: AG137_bin.21_CGC30
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: AG137_bin.21
- CGC Family ID: CGCFAM_03215
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_250845 | k141_250845_48 | 48573 | 50009 | + | 1.B.52.2.2 |
| TF | k141_250845 | k141_250845_49 | 50102 | 50845 | + | LytTR |
| STP | k141_250845 | k141_250845_50 | 50954 | 51616 | + | HATPase_c |
| TC | k141_250845 | k141_250845_51 | 52049 | 53899 | + | 3.A.1.111.2 |
| TC | k141_250845 | k141_250845_52 | 53880 | 55694 | + | 3.A.1.111.2 |
| CAZyme | k141_250845 | k141_250845_53 | 55831 | 59931 | + | GH25 |
| TC | k141_250845 | k141_250845_54 | 59976 | 62330 | + | 1.C.39.4.6 |
| pfam | k141_250845 | k141_250845_55 | 62341 | 63312 | + | Dus |
| CAZyme | k141_250845 | k141_250845_56 | 63459 | 65012 | + | GH43_4 |
| TC | k141_250845 | k141_250845_57 | 65088 | 66473 | + | 2.A.25.1.4 |
| CAZyme | k141_250845 | k141_250845_58 | 66642 | 67601 | + | GH43_26 |
| CAZyme | k141_250845 | k141_250845_59 | 67622 | 69127 | + | GH51_1 |
Gene ID: k141_250845_48
Type: TC
Location: 48573 - 50009 (+)
Type: TC
Location: 48573 - 50009 (+)
Gene ID: k141_250845_49
Type: TF
Location: 50102 - 50845 (+)
Type: TF
Location: 50102 - 50845 (+)
Gene ID: k141_250845_50
Type: STP
Location: 50954 - 51616 (+)
Type: STP
Location: 50954 - 51616 (+)
Gene ID: k141_250845_51
Type: TC
Location: 52049 - 53899 (+)
Type: TC
Location: 52049 - 53899 (+)
Gene ID: k141_250845_52
Type: TC
Location: 53880 - 55694 (+)
Type: TC
Location: 53880 - 55694 (+)
Gene ID: k141_250845_53
Type: CAZyme
Location: 55831 - 59931 (+)
Type: CAZyme
Location: 55831 - 59931 (+)
Gene ID: k141_250845_54
Type: TC
Location: 59976 - 62330 (+)
Type: TC
Location: 59976 - 62330 (+)
Gene ID: k141_250845_55
Type: pfam
Location: 62341 - 63312 (+)
Type: pfam
Location: 62341 - 63312 (+)
Gene ID: k141_250845_56
Type: CAZyme
Location: 63459 - 65012 (+)
Type: CAZyme
Location: 63459 - 65012 (+)
Gene ID: k141_250845_57
Type: TC
Location: 65088 - 66473 (+)
Type: TC
Location: 65088 - 66473 (+)
Gene ID: k141_250845_58
Type: CAZyme
Location: 66642 - 67601 (+)
Type: CAZyme
Location: 66642 - 67601 (+)
Gene ID: k141_250845_59
Type: CAZyme
Location: 67622 - 69127 (+)
Type: CAZyme
Location: 67622 - 69127 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia rectibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_250845_49 | vegan > omnivore | 1.31703 | 0.02366 |
| k141_250845_49 | vegetarian > omnivore | 1.33844 | 0.00514 |
| k141_250845_50 | vegan > omnivore | 1.76885 | 0.02366 |
| k141_250845_50 | vegetarian > omnivore | 1.30526 | 0.00514 |
| k141_250845_52 | vegetarian > omnivore | 1.18923 | 0.00514 |
| k141_250845_56 | vegan > omnivore | 1.23579 | 0.02366 |
| k141_250845_58 | vegetarian > omnivore | 1.39259 | 0.00514 |
| k141_250845_59 | vegan > omnivore | 1.02654 | 0.02366 |