Cluster: AG137_bin.21_CGC20
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate: alpha-glucan
- Genome ID: AG137_bin.21
- CGC Family ID: CGCFAM_02945
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22776 | k141_22776_17 | 15147 | 17423 | - | GH36 |
| CAZyme | k141_22776 | k141_22776_18 | 17500 | 19182 | - | GH13_31 |
| TF | k141_22776 | k141_22776_19 | 19264 | 20241 | - | LacI |
| CAZyme | k141_22776 | k141_22776_20 | 20313 | 21923 | - | GH32 |
| NULL(UNKNOWN) | k141_22776 | k141_22776_21 | 21994 | 22467 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_22776 | k141_22776_22 | 22687 | 26805 | - | CBM22 | CBM86 | CBM9 | GH10 |
| CAZyme | k141_22776 | k141_22776_23 | 27040 | 30828 | - | CBM61 | CBM61 | GH53 |
| TC | k141_22776 | k141_22776_24 | 31258 | 33276 | + | 1.B.52.2.2 |
| pfam | k141_22776 | k141_22776_25 | 33419 | 33682 | - | Ribosomal_S18 |
| TC | k141_22776 | k141_22776_26 | 33713 | 34159 | - | 3.A.7.19.1 |
Gene ID: k141_22776_17
Type: CAZyme
Location: 15147 - 17423 (-)
Type: CAZyme
Location: 15147 - 17423 (-)
Gene ID: k141_22776_18
Type: CAZyme
Location: 17500 - 19182 (-)
Type: CAZyme
Location: 17500 - 19182 (-)
Gene ID: k141_22776_19
Type: TF
Location: 19264 - 20241 (-)
Type: TF
Location: 19264 - 20241 (-)
Gene ID: k141_22776_20
Type: CAZyme
Location: 20313 - 21923 (-)
Type: CAZyme
Location: 20313 - 21923 (-)
Gene ID: k141_22776_21
Type:
Location: 21994 - 22467 (-)
Type:
Location: 21994 - 22467 (-)
Gene ID: k141_22776_22
Type: CAZyme
Location: 22687 - 26805 (-)
Type: CAZyme
Location: 22687 - 26805 (-)
Gene ID: k141_22776_23
Type: CAZyme
Location: 27040 - 30828 (-)
Type: CAZyme
Location: 27040 - 30828 (-)
Gene ID: k141_22776_24
Type: TC
Location: 31258 - 33276 (+)
Type: TC
Location: 31258 - 33276 (+)
Gene ID: k141_22776_25
Type: pfam
Location: 33419 - 33682 (-)
Type: pfam
Location: 33419 - 33682 (-)
Gene ID: k141_22776_26
Type: TC
Location: 33713 - 34159 (-)
Type: TC
Location: 33713 - 34159 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia rectibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_22776_19 | vegetarian > omnivore | 1.29702 | 0.00514 |
| k141_22776_19 | vegetarian > vegan | 1.04569 | 0.00364 |