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Cluster: AG137_bin.21_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_148341 k141_148341_24 32870 34159 + GH125
CAZyme k141_148341 k141_148341_25 34264 36939 + GH38
TF k141_148341 k141_148341_26 37166 38200 - LacI
TC k141_148341 k141_148341_27 38519 39475 + 3.A.1.1.10
TC k141_148341 k141_148341_28 39487 40404 + 3.A.1.1.29
STP k141_148341 k141_148341_29 40484 41971 + SBP_bac_1
CAZyme k141_148341 k141_148341_30 42088 43068 + GH130_2
CAZyme k141_148341 k141_148341_31 43090 46179 + GH38
pfam k141_148341 k141_148341_32 46253 47545 + MFS_1
CAZyme k141_148341 k141_148341_33 47556 49751 + GH3
CAZyme k141_148341 k141_148341_34 49783 51624 + GH20
TF k141_148341 k141_148341_35 51834 52382 + SpoVT_AbrB
pfam k141_148341 k141_148341_36 52516 53574 + Metallophos
TC k141_148341 k141_148341_37 53565 55244 + 1.C.105.2.8
CAZyme k141_148341 k141_148341_38 55258 57651 + GT51
Gene ID: k141_148341_24
Type: CAZyme
Location: 32870 - 34159 (+)
Gene ID: k141_148341_25
Type: CAZyme
Location: 34264 - 36939 (+)
Gene ID: k141_148341_26
Type: TF
Location: 37166 - 38200 (-)
Gene ID: k141_148341_27
Type: TC
Location: 38519 - 39475 (+)
Gene ID: k141_148341_28
Type: TC
Location: 39487 - 40404 (+)
Gene ID: k141_148341_29
Type: STP
Location: 40484 - 41971 (+)
Gene ID: k141_148341_30
Type: CAZyme
Location: 42088 - 43068 (+)
Gene ID: k141_148341_31
Type: CAZyme
Location: 43090 - 46179 (+)
Gene ID: k141_148341_32
Type: pfam
Location: 46253 - 47545 (+)
Gene ID: k141_148341_33
Type: CAZyme
Location: 47556 - 49751 (+)
Gene ID: k141_148341_34
Type: CAZyme
Location: 49783 - 51624 (+)
Gene ID: k141_148341_35
Type: TF
Location: 51834 - 52382 (+)
Gene ID: k141_148341_36
Type: pfam
Location: 52516 - 53574 (+)
Gene ID: k141_148341_37
Type: TC
Location: 53565 - 55244 (+)
Gene ID: k141_148341_38
Type: CAZyme
Location: 55258 - 57651 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_148341_25 vegetarian > omnivore 1.00230 0.00514
k141_148341_32 vegetarian > vegan 1.01890 0.00364
k141_148341_33 vegetarian > omnivore 1.21522 0.00514

🧭 Explore Read Mapping of CGC

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