Cluster: AG137_bin.21_CGC17
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: AG137_bin.21
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_171090 | k141_171090_13 | 13568 | 14941 | - | 2.A.2.3.9 |
| TF | k141_171090 | k141_171090_14 | 15142 | 16113 | + | HTH_AraC |
| pfam | k141_171090 | k141_171090_15 | 16278 | 17363 | - | UxuA |
| CAZyme | k141_171090 | k141_171090_16 | 17641 | 18453 | - | CBM50 |
| TC | k141_171090 | k141_171090_17 | 18591 | 19283 | - | 2.A.122.1.4 |
| TC | k141_171090 | k141_171090_18 | 19280 | 19624 | - | 1.E.14.1.1 |
| pfam | k141_171090 | k141_171090_19 | 19856 | 20512 | - | CxxCxxCC |
| peptidase | k141_171090 | k141_171090_20 | 20616 | 21797 | - | S09.UPW |
| TC | k141_171090 | k141_171090_21 | 22486 | 23844 | + | 3.A.3.1.8 |
| TC | k141_171090 | k141_171090_22 | 23851 | 25290 | + | 2.A.38.1.1 |
| pfam | k141_171090 | k141_171090_23 | 25354 | 26214 | + | Cons_hypoth95 | Methyltrans_SAM |
| TC | k141_171090 | k141_171090_24 | 26306 | 27247 | - | 1.A.35.3.1 |
Gene ID: k141_171090_13
Type: TC
Location: 13568 - 14941 (-)
Type: TC
Location: 13568 - 14941 (-)
Gene ID: k141_171090_14
Type: TF
Location: 15142 - 16113 (+)
Type: TF
Location: 15142 - 16113 (+)
Gene ID: k141_171090_15
Type: pfam
Location: 16278 - 17363 (-)
Type: pfam
Location: 16278 - 17363 (-)
Gene ID: k141_171090_16
Type: CAZyme
Location: 17641 - 18453 (-)
Type: CAZyme
Location: 17641 - 18453 (-)
Gene ID: k141_171090_17
Type: TC
Location: 18591 - 19283 (-)
Type: TC
Location: 18591 - 19283 (-)
Gene ID: k141_171090_18
Type: TC
Location: 19280 - 19624 (-)
Type: TC
Location: 19280 - 19624 (-)
Gene ID: k141_171090_19
Type: pfam
Location: 19856 - 20512 (-)
Type: pfam
Location: 19856 - 20512 (-)
Gene ID: k141_171090_20
Type: peptidase
Location: 20616 - 21797 (-)
Type: peptidase
Location: 20616 - 21797 (-)
Gene ID: k141_171090_21
Type: TC
Location: 22486 - 23844 (+)
Type: TC
Location: 22486 - 23844 (+)
Gene ID: k141_171090_22
Type: TC
Location: 23851 - 25290 (+)
Type: TC
Location: 23851 - 25290 (+)
Gene ID: k141_171090_23
Type: pfam
Location: 25354 - 26214 (+)
Type: pfam
Location: 25354 - 26214 (+)
Gene ID: k141_171090_24
Type: TC
Location: 26306 - 27247 (-)
Type: TC
Location: 26306 - 27247 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia rectibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_171090_15 | vegetarian > omnivore | 1.62856 | 0.00514 |
| k141_171090_19 | vegan > omnivore | 1.34727 | 0.02366 |
| k141_171090_19 | vegetarian > omnivore | 1.75505 | 0.00514 |
| k141_171090_20 | vegetarian > omnivore | 1.18530 | 0.00514 |
| k141_171090_21 | vegetarian > omnivore | 1.12253 | 0.00514 |