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Cluster: AG137_bin.21_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_148341 k141_148341_6 3691 5193 + 3.A.2.1.5
TC k141_148341 k141_148341_7 5200 6093 + 3.A.2.1.5
TC k141_148341 k141_148341_8 6114 7520 + 3.A.2.1.5
TC k141_148341 k141_148341_9 7532 7951 + 3.A.2.1.5
TF k141_148341 k141_148341_10 7984 8811 - HTH_AraC
CAZyme k141_148341 k141_148341_11 9875 12292 + GH3
CAZyme k141_148341 k141_148341_12 12480 15284 + GH3
CAZyme k141_148341 k141_148341_13 15477 19331 + CBM23 | CBM27 | GH26
TC k141_148341 k141_148341_14 19467 20210 - 3.A.1.3.28
TC k141_148341 k141_148341_15 20220 20912 - 3.A.1.3.14
TC k141_148341 k141_148341_16 20993 21829 - 3.A.1.3.14
STP k141_148341 k141_148341_17 22007 23938 - EAL
CAZyme k141_148341 k141_148341_18 24082 26418 + CBM61 | GH53
TC k141_148341 k141_148341_19 26703 28820 + 1.B.52.2.1
Gene ID: k141_148341_6
Type: TC
Location: 3691 - 5193 (+)
Gene ID: k141_148341_7
Type: TC
Location: 5200 - 6093 (+)
Gene ID: k141_148341_8
Type: TC
Location: 6114 - 7520 (+)
Gene ID: k141_148341_9
Type: TC
Location: 7532 - 7951 (+)
Gene ID: k141_148341_10
Type: TF
Location: 7984 - 8811 (-)
Gene ID: k141_148341_11
Type: CAZyme
Location: 9875 - 12292 (+)
Gene ID: k141_148341_12
Type: CAZyme
Location: 12480 - 15284 (+)
Gene ID: k141_148341_13
Type: CAZyme
Location: 15477 - 19331 (+)
Gene ID: k141_148341_14
Type: TC
Location: 19467 - 20210 (-)
Gene ID: k141_148341_15
Type: TC
Location: 20220 - 20912 (-)
Gene ID: k141_148341_16
Type: TC
Location: 20993 - 21829 (-)
Gene ID: k141_148341_17
Type: STP
Location: 22007 - 23938 (-)
Gene ID: k141_148341_18
Type: CAZyme
Location: 24082 - 26418 (+)
Gene ID: k141_148341_19
Type: TC
Location: 26703 - 28820 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_148341_7 vegetarian > omnivore 1.22914 0.00514
k141_148341_9 vegetarian > omnivore 1.19382 0.00514
k141_148341_9 vegetarian > vegan 1.85595 0.00364
k141_148341_15 vegan > omnivore 1.31497 0.01684
k141_148341_15 vegetarian > omnivore 1.04135 0.00514
k141_148341_17 vegetarian > omnivore 1.17248 0.00514
k141_148341_17 vegan > omnivore 1.36988 0.02366
k141_148341_18 vegetarian > vegan 1.76381 0.00364
k141_148341_18 vegetarian > omnivore 1.57362 0.00514

🧭 Explore Read Mapping of CGC

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