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Cluster: AG136_44_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_135515 k141_135515_73 73788 75062 + 2.A.9.2.2
pfam k141_135515 k141_135515_74 75059 75802 + R3H | KH_2 | KH_KhpA-B | Jag_N
TC k141_135515 k141_135515_75 75827 76054 + 3.D.1.6.4
CAZyme k141_135515 k141_135515_76 76170 76967 - CE4
pfam k141_135515 k141_135515_77 77040 77759 - DUF218
TC k141_135515 k141_135515_78 77752 79629 - 3.A.1.121.4
pfam k141_135515 k141_135515_79 79645 80931 - Transpeptidase
TC k141_135515 k141_135515_80 80928 82649 - 2.A.103.1.6
pfam k141_135515 k141_135515_81 82715 83125 + NusG_II
TC k141_135515 k141_135515_82 83118 83618 + 2.A.87.3.1
TC k141_135515 k141_135515_83 83665 84495 + 3.A.1.132.3
Gene ID: k141_135515_73
Type: TC
Location: 73788 - 75062 (+)
Gene ID: k141_135515_74
Type: pfam
Location: 75059 - 75802 (+)
Gene ID: k141_135515_75
Type: TC
Location: 75827 - 76054 (+)
Gene ID: k141_135515_76
Type: CAZyme
Location: 76170 - 76967 (-)
Gene ID: k141_135515_77
Type: pfam
Location: 77040 - 77759 (-)
Gene ID: k141_135515_78
Type: TC
Location: 77752 - 79629 (-)
Gene ID: k141_135515_79
Type: pfam
Location: 79645 - 80931 (-)
Gene ID: k141_135515_80
Type: TC
Location: 80928 - 82649 (-)
Gene ID: k141_135515_81
Type: pfam
Location: 82715 - 83125 (+)
Gene ID: k141_135515_82
Type: TC
Location: 83118 - 83618 (+)
Gene ID: k141_135515_83
Type: TC
Location: 83665 - 84495 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_135515_80 vegetarian > vegan 1.63796 0.01009
k141_135515_81 vegetarian > vegan 1.24494 0.01009

🧭 Explore Read Mapping of CGC

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