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Cluster: AG136_44_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_46555 k141_46555_1 188 1630 - 2.A.38.1.5
TC k141_46555 k141_46555_2 1630 2988 - 2.A.38.1.1
TF k141_46555 k141_46555_3 3039 3926 - HTH_1
TC k141_46555 k141_46555_4 4108 5643 + 2.A.21.2.5
pfam k141_46555 k141_46555_5 6212 6982 - Cyclase
NULL(UNKNOWN) k141_46555 k141_46555_6 7075 7407 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_46555 k141_46555_7 7508 8389 - GH25
Gene ID: k141_46555_1
Type: TC
Location: 188 - 1630 (-)
Gene ID: k141_46555_2
Type: TC
Location: 1630 - 2988 (-)
Gene ID: k141_46555_3
Type: TF
Location: 3039 - 3926 (-)
Gene ID: k141_46555_4
Type: TC
Location: 4108 - 5643 (+)
Gene ID: k141_46555_5
Type: pfam
Location: 6212 - 6982 (-)
Gene ID: k141_46555_6
Type:
Location: 7075 - 7407 (+)
Gene ID: k141_46555_7
Type: CAZyme
Location: 7508 - 8389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_46555_2 vegetarian > vegan 1.35591 0.01009
k141_46555_7 vegetarian > vegan 1.30825 0.01009

🧭 Explore Read Mapping of CGC

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