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Cluster: AG133_45_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_217867 k141_217867_59 65927 68365 - 3.D.1.5.1
TC k141_217867 k141_217867_60 68367 70223 - 3.D.1.5.1
TC k141_217867 k141_217867_61 70227 70676 - 3.D.1.5.1
pfam k141_217867 k141_217867_62 71182 72294 - Methyltr_RsmB-F
pfam k141_217867 k141_217867_63 72570 74600 + GreA_GreB | GreA_GreB_N
CAZyme k141_217867 k141_217867_64 74575 77064 - GH127
NULL(UNKNOWN) k141_217867 k141_217867_65 77158 79149 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_217867 k141_217867_66 79146 81116 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_217867 k141_217867_67 81405 82727 - 3.A.5.1.1
Gene ID: k141_217867_59
Type: TC
Location: 65927 - 68365 (-)
Gene ID: k141_217867_60
Type: TC
Location: 68367 - 70223 (-)
Gene ID: k141_217867_61
Type: TC
Location: 70227 - 70676 (-)
Gene ID: k141_217867_62
Type: pfam
Location: 71182 - 72294 (-)
Gene ID: k141_217867_63
Type: pfam
Location: 72570 - 74600 (+)
Gene ID: k141_217867_64
Type: CAZyme
Location: 74575 - 77064 (-)
Gene ID: k141_217867_65
Type:
Location: 77158 - 79149 (+)
Gene ID: k141_217867_66
Type:
Location: 79146 - 81116 (+)
Gene ID: k141_217867_67
Type: TC
Location: 81405 - 82727 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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