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Cluster: AG132_115_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_246364 k141_246364_15 13918 14781 - 3.A.1.7.5
TC k141_246364 k141_246364_16 14785 15633 - 3.A.1.7.5
TC k141_246364 k141_246364_17 15626 16510 - 3.A.1.7.5
pfam k141_246364 k141_246364_18 16573 17424 - PBP_like_2 | PBP_like_2
TC k141_246364 k141_246364_19 17636 18733 - 2.A.86.1.8
CAZyme k141_246364 k141_246364_20 18895 21135 + GH31_15
TC k141_246364 k141_246364_21 21167 21811 - 1.C.113.1.1
TF k141_246364 k141_246364_22 21944 22219 + HTH_5
TC k141_246364 k141_246364_23 22238 23224 + 2.A.119.1.3
Gene ID: k141_246364_15
Type: TC
Location: 13918 - 14781 (-)
Gene ID: k141_246364_16
Type: TC
Location: 14785 - 15633 (-)
Gene ID: k141_246364_17
Type: TC
Location: 15626 - 16510 (-)
Gene ID: k141_246364_18
Type: pfam
Location: 16573 - 17424 (-)
Gene ID: k141_246364_19
Type: TC
Location: 17636 - 18733 (-)
Gene ID: k141_246364_20
Type: CAZyme
Location: 18895 - 21135 (+)
Gene ID: k141_246364_21
Type: TC
Location: 21167 - 21811 (-)
Gene ID: k141_246364_22
Type: TF
Location: 21944 - 22219 (+)
Gene ID: k141_246364_23
Type: TC
Location: 22238 - 23224 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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