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Cluster: AG132_115_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_248601 k141_248601_30 28490 29560 + GH177
pfam k141_248601 k141_248601_31 29666 30754 - IF-2B
pfam k141_248601 k141_248601_32 30754 31974 - APH
TC k141_248601 k141_248601_33 31993 32985 - 3.A.1.2.1
TC k141_248601 k141_248601_34 32998 34512 - 3.A.1.2.19
pfam k141_248601 k141_248601_35 34568 35680 - Peripla_BP_4
TF k141_248601 k141_248601_36 35722 36726 - LacI
TC k141_248601 k141_248601_37 36956 38503 - 3.A.1.106.15
peptidase k141_248601 k141_248601_38 38700 40193 - M32.UPW
CAZyme k141_248601 k141_248601_39 40322 41434 + CE9
Gene ID: k141_248601_30
Type: CAZyme
Location: 28490 - 29560 (+)
Gene ID: k141_248601_31
Type: pfam
Location: 29666 - 30754 (-)
Gene ID: k141_248601_32
Type: pfam
Location: 30754 - 31974 (-)
Gene ID: k141_248601_33
Type: TC
Location: 31993 - 32985 (-)
Gene ID: k141_248601_34
Type: TC
Location: 32998 - 34512 (-)
Gene ID: k141_248601_35
Type: pfam
Location: 34568 - 35680 (-)
Gene ID: k141_248601_36
Type: TF
Location: 35722 - 36726 (-)
Gene ID: k141_248601_37
Type: TC
Location: 36956 - 38503 (-)
Gene ID: k141_248601_38
Type: peptidase
Location: 38700 - 40193 (-)
Gene ID: k141_248601_39
Type: CAZyme
Location: 40322 - 41434 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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