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Cluster: AG132_115_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_52185 k141_52185_24 23021 24409 + 2.A.66.1.12
pfam k141_52185 k141_52185_25 24416 25384 + DHQ_synthase | DHQS_C
pfam k141_52185 k141_52185_26 25412 26173 + Inositol_P
TC k141_52185 k141_52185_27 26487 27797 + 2.A.40.1.4
pfam k141_52185 k141_52185_28 27922 28917 + PG_binding_1
TF k141_52185 k141_52185_29 29235 30221 + LacI
CAZyme k141_52185 k141_52185_30 30225 31895 + GH13_20
STP k141_52185 k141_52185_31 31911 33152 + SBP_bac_1
TC k141_52185 k141_52185_32 33272 34159 + 3.A.1.1.11
TC k141_52185 k141_52185_33 34162 35013 + 3.A.1.1.24
Gene ID: k141_52185_24
Type: TC
Location: 23021 - 24409 (+)
Gene ID: k141_52185_25
Type: pfam
Location: 24416 - 25384 (+)
Gene ID: k141_52185_26
Type: pfam
Location: 25412 - 26173 (+)
Gene ID: k141_52185_27
Type: TC
Location: 26487 - 27797 (+)
Gene ID: k141_52185_28
Type: pfam
Location: 27922 - 28917 (+)
Gene ID: k141_52185_29
Type: TF
Location: 29235 - 30221 (+)
Gene ID: k141_52185_30
Type: CAZyme
Location: 30225 - 31895 (+)
Gene ID: k141_52185_31
Type: STP
Location: 31911 - 33152 (+)
Gene ID: k141_52185_32
Type: TC
Location: 33272 - 34159 (+)
Gene ID: k141_52185_33
Type: TC
Location: 34162 - 35013 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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