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Cluster: AG105_45_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_237593 k141_237593_2 568 1506 - GT9
pfam k141_237593 k141_237593_3 1698 3077 + SDH_alpha | SDH_beta
TC k141_237593 k141_237593_4 3113 4060 + 2.A.7.3.19
pfam k141_237593 k141_237593_5 4023 5030 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_237593 k141_237593_6 5144 6601 + RNase_E_G | RNase_E_G_Thio
CAZyme k141_237593 k141_237593_7 6736 7515 + GT25
Gene ID: k141_237593_2
Type: CAZyme
Location: 568 - 1506 (-)
Gene ID: k141_237593_3
Type: pfam
Location: 1698 - 3077 (+)
Gene ID: k141_237593_4
Type: TC
Location: 3113 - 4060 (+)
Gene ID: k141_237593_5
Type: pfam
Location: 4023 - 5030 (-)
Gene ID: k141_237593_6
Type: pfam
Location: 5144 - 6601 (+)
Gene ID: k141_237593_7
Type: CAZyme
Location: 6736 - 7515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_237593_2 vegan > omnivore 3.61931 0.02745
k141_237593_2 vegetarian > omnivore 3.23372 0.02248
k141_237593_4 vegan > omnivore 2.21057 0.02745
k141_237593_4 vegetarian > omnivore 1.41508 0.02248
k141_237593_5 vegan > omnivore 1.85986 0.02745
k141_237593_5 vegetarian > omnivore 1.26220 0.02248
k141_237593_6 vegan > omnivore 2.10096 0.02745
k141_237593_6 vegetarian > omnivore 1.33585 0.02248

🧭 Explore Read Mapping of CGC

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