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Cluster: AG105_45_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_316832 k141_316832_17 20902 21654 + GT2
pfam k141_316832 k141_316832_18 21664 22647 + Lip_A_acyltrans
pfam k141_316832 k141_316832_19 22644 23270 + LolA
TC k141_316832 k141_316832_20 23472 26066 + 2.A.37.1.5
TC k141_316832 k141_316832_21 26077 28440 + 2.A.6.8.2
Gene ID: k141_316832_17
Type: CAZyme
Location: 20902 - 21654 (+)
Gene ID: k141_316832_18
Type: pfam
Location: 21664 - 22647 (+)
Gene ID: k141_316832_19
Type: pfam
Location: 22644 - 23270 (+)
Gene ID: k141_316832_20
Type: TC
Location: 23472 - 26066 (+)
Gene ID: k141_316832_21
Type: TC
Location: 26077 - 28440 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_316832_18 vegan > omnivore 18.41823 0.02745
k141_316832_18 vegetarian > omnivore 17.27534 0.02248
k141_316832_19 vegan > omnivore 19.09705 0.02745
k141_316832_19 vegetarian > omnivore 18.04244 0.02248
k141_316832_20 vegan > omnivore 1.45457 0.02745
k141_316832_21 vegan > omnivore 1.59122 0.02745

🧭 Explore Read Mapping of CGC

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