Cluster: AG100_maxbin.023_CGC19
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: AG100_maxbin.023
- CGC Family ID: CGCFAM_00024
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_196828 | k141_196828_3 | 2647 | 3441 | - | 3.A.1.34.1 |
| TC | k141_196828 | k141_196828_4 | 3434 | 4357 | - | 3.A.1.34.1 |
| TC | k141_196828 | k141_196828_5 | 4562 | 5542 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | k141_196828 | k141_196828_6 | 5703 | 6488 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_196828 | k141_196828_7 | 6738 | 8141 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | k141_196828 | k141_196828_8 | 8322 | 8885 | - | 4.A.1.2.6 |
| peptidase | k141_196828 | k141_196828_9 | 9130 | 10032 | + | S09.UPW |
| TC | k141_196828 | k141_196828_10 | 10445 | 12805 | + | 9.A.8.1.6 |
| TC | k141_196828 | k141_196828_11 | 12927 | 14123 | + | 2.A.1.2.18 |
| CAZyme | k141_196828 | k141_196828_12 | 14306 | 15682 | + | GH13_20 |
Gene ID: k141_196828_3
Type: TC
Location: 2647 - 3441 (-)
Type: TC
Location: 2647 - 3441 (-)
Gene ID: k141_196828_4
Type: TC
Location: 3434 - 4357 (-)
Type: TC
Location: 3434 - 4357 (-)
Gene ID: k141_196828_5
Type: TC
Location: 4562 - 5542 (-)
Type: TC
Location: 4562 - 5542 (-)
Gene ID: k141_196828_6
Type:
Location: 5703 - 6488 (-)
Type:
Location: 5703 - 6488 (-)
Gene ID: k141_196828_7
Type: pfam
Location: 6738 - 8141 (-)
Type: pfam
Location: 6738 - 8141 (-)
Gene ID: k141_196828_8
Type: TC
Location: 8322 - 8885 (-)
Type: TC
Location: 8322 - 8885 (-)
Gene ID: k141_196828_9
Type: peptidase
Location: 9130 - 10032 (+)
Type: peptidase
Location: 9130 - 10032 (+)
Gene ID: k141_196828_10
Type: TC
Location: 10445 - 12805 (+)
Type: TC
Location: 10445 - 12805 (+)
Gene ID: k141_196828_11
Type: TC
Location: 12927 - 14123 (+)
Type: TC
Location: 12927 - 14123 (+)
Gene ID: k141_196828_12
Type: CAZyme
Location: 14306 - 15682 (+)
Type: CAZyme
Location: 14306 - 15682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.