Cluster: AG099_bin.45_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG099_bin.45
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_280233 | k141_280233_6 | 4980 | 6197 | - | GT4 |
| pfam | k141_280233 | k141_280233_7 | 6212 | 6976 | - | BcrAD_BadFG |
| pfam | k141_280233 | k141_280233_8 | 7027 | 8190 | - | HGD-D |
| TC | k141_280233 | k141_280233_9 | 8268 | 9053 | - | 3.A.1.5.36 |
| TC | k141_280233 | k141_280233_10 | 9040 | 10038 | - | 3.A.1.5.35 |
| TC | k141_280233 | k141_280233_11 | 10042 | 10869 | - | 3.A.1.5.39 |
| TC | k141_280233 | k141_280233_12 | 10869 | 11822 | - | 3.A.1.5.11 |
| TC | k141_280233 | k141_280233_13 | 11910 | 13520 | - | 3.A.1.5.11 |
| pfam | k141_280233 | k141_280233_14 | 13705 | 14988 | - | HGD-D |
| TC | k141_280233 | k141_280233_15 | 15439 | 16509 | - | 3.A.1.1.3 |
| TC | k141_280233 | k141_280233_16 | 16513 | 17994 | - | 3.A.1.8.1 |
Gene ID: k141_280233_6
Type: CAZyme
Location: 4980 - 6197 (-)
Type: CAZyme
Location: 4980 - 6197 (-)
Gene ID: k141_280233_7
Type: pfam
Location: 6212 - 6976 (-)
Type: pfam
Location: 6212 - 6976 (-)
Gene ID: k141_280233_8
Type: pfam
Location: 7027 - 8190 (-)
Type: pfam
Location: 7027 - 8190 (-)
Gene ID: k141_280233_9
Type: TC
Location: 8268 - 9053 (-)
Type: TC
Location: 8268 - 9053 (-)
Gene ID: k141_280233_10
Type: TC
Location: 9040 - 10038 (-)
Type: TC
Location: 9040 - 10038 (-)
Gene ID: k141_280233_11
Type: TC
Location: 10042 - 10869 (-)
Type: TC
Location: 10042 - 10869 (-)
Gene ID: k141_280233_12
Type: TC
Location: 10869 - 11822 (-)
Type: TC
Location: 10869 - 11822 (-)
Gene ID: k141_280233_13
Type: TC
Location: 11910 - 13520 (-)
Type: TC
Location: 11910 - 13520 (-)
Gene ID: k141_280233_14
Type: pfam
Location: 13705 - 14988 (-)
Type: pfam
Location: 13705 - 14988 (-)
Gene ID: k141_280233_15
Type: TC
Location: 15439 - 16509 (-)
Type: TC
Location: 15439 - 16509 (-)
Gene ID: k141_280233_16
Type: TC
Location: 16513 - 17994 (-)
Type: TC
Location: 16513 - 17994 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_280233_6 | vegan > omnivore | 1.67848 | 0.00701 |
| k141_280233_9 | vegan > omnivore | 2.52514 | 0.00701 |
| k141_280233_10 | vegan > omnivore | 1.19053 | 0.00701 |
| k141_280233_11 | vegan > omnivore | 2.73008 | 0.00701 |
| k141_280233_12 | vegan > omnivore | 2.38162 | 0.00701 |
| k141_280233_13 | vegan > omnivore | 2.89321 | 0.00701 |