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Cluster: AG099_bin.45_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_73404 k141_73404_6 7147 7977 - 3.A.1.132.3
pfam k141_73404 k141_73404_7 8237 11116 + UvrA_DNA-bind | UvrA_inter
pfam k141_73404 k141_73404_8 11250 11750 + tRNA_edit
TC k141_73404 k141_73404_9 11754 14039 + 2.A.66.4.4
pfam k141_73404 k141_73404_10 14046 15986 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC k141_73404 k141_73404_11 16352 17965 + 3.A.1.5.27
TC k141_73404 k141_73404_12 18123 19079 + 3.A.1.5.38
TC k141_73404 k141_73404_13 19083 21098 + 3.A.1.5.25
TC k141_73404 k141_73404_14 21099 21926 + 3.A.1.5.27
CAZyme k141_73404 k141_73404_15 22058 22984 + CE7
Gene ID: k141_73404_6
Type: TC
Location: 7147 - 7977 (-)
Gene ID: k141_73404_7
Type: pfam
Location: 8237 - 11116 (+)
Gene ID: k141_73404_8
Type: pfam
Location: 11250 - 11750 (+)
Gene ID: k141_73404_9
Type: TC
Location: 11754 - 14039 (+)
Gene ID: k141_73404_10
Type: pfam
Location: 14046 - 15986 (+)
Gene ID: k141_73404_11
Type: TC
Location: 16352 - 17965 (+)
Gene ID: k141_73404_12
Type: TC
Location: 18123 - 19079 (+)
Gene ID: k141_73404_13
Type: TC
Location: 19083 - 21098 (+)
Gene ID: k141_73404_14
Type: TC
Location: 21099 - 21926 (+)
Gene ID: k141_73404_15
Type: CAZyme
Location: 22058 - 22984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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