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Cluster: AG093_113_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_44984 k141_44984_47 71099 73027 + 3.A.1.120.6
pfam k141_44984 k141_44984_48 73379 76018 - Glyco_hydro_42
pfam k141_44984 k141_44984_49 76038 78707 - Glyco_hydro_42
TC k141_44984 k141_44984_50 79009 81498 - 3.A.7.7.1
pfam k141_44984 k141_44984_51 81592 82674 - Aminotran_5
pfam k141_44984 k141_44984_52 82739 83110 - Asp_decarbox
TC k141_44984 k141_44984_53 83228 86023 - 3.A.12.1.1
pfam k141_44984 k141_44984_54 86047 87708 - SMC_N | AAA_23
CAZyme k141_44984 k141_44984_55 87897 89249 + CE11
Gene ID: k141_44984_47
Type: TC
Location: 71099 - 73027 (+)
Gene ID: k141_44984_48
Type: pfam
Location: 73379 - 76018 (-)
Gene ID: k141_44984_49
Type: pfam
Location: 76038 - 78707 (-)
Gene ID: k141_44984_50
Type: TC
Location: 79009 - 81498 (-)
Gene ID: k141_44984_51
Type: pfam
Location: 81592 - 82674 (-)
Gene ID: k141_44984_52
Type: pfam
Location: 82739 - 83110 (-)
Gene ID: k141_44984_53
Type: TC
Location: 83228 - 86023 (-)
Gene ID: k141_44984_54
Type: pfam
Location: 86047 - 87708 (-)
Gene ID: k141_44984_55
Type: CAZyme
Location: 87897 - 89249 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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