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Cluster: AG093_113_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11548 k141_11548_87 79193 80230 + 2.A.7.6.1
peptidase k141_11548 k141_11548_88 80488 82095 + C26.964
pfam k141_11548 k141_11548_89 82096 82896 + DAHP_synth_1
CAZyme k141_11548 k141_11548_90 83080 84516 + GH13
pfam k141_11548 k141_11548_91 84633 85757 - Epimerase_2
pfam k141_11548 k141_11548_92 85761 86903 - Epimerase | Polysacc_synt_2 | GPI | NAD_binding_4 | Polysacc_synt_C
TC k141_11548 k141_11548_93 86888 87904 - 9.B.18.2.1
CAZyme k141_11548 k141_11548_94 87948 89156 - GT4
Gene ID: k141_11548_87
Type: TC
Location: 79193 - 80230 (+)
Gene ID: k141_11548_88
Type: peptidase
Location: 80488 - 82095 (+)
Gene ID: k141_11548_89
Type: pfam
Location: 82096 - 82896 (+)
Gene ID: k141_11548_90
Type: CAZyme
Location: 83080 - 84516 (+)
Gene ID: k141_11548_91
Type: pfam
Location: 84633 - 85757 (-)
Gene ID: k141_11548_92
Type: pfam
Location: 85761 - 86903 (-)
Gene ID: k141_11548_93
Type: TC
Location: 86888 - 87904 (-)
Gene ID: k141_11548_94
Type: CAZyme
Location: 87948 - 89156 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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