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Cluster: AG093_113_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_372423 k141_372423_142 167783 169288 - 2.A.21.3.7
STP k141_372423 k141_372423_143 169292 170056 - SIS
TC k141_372423 k141_372423_144 170233 171372 - 2.A.86.1.5
pfam k141_372423 k141_372423_145 171404 174274 + ABC_tran | UvrA_DNA-bind | UvrA_inter
pfam k141_372423 k141_372423_146 174326 175183 + MotA_ExbB
TC k141_372423 k141_372423_147 175193 175603 + 1.A.30.2.7
pfam k141_372423 k141_372423_148 175600 176445 + TonB_C | TonB_2
TC k141_372423 k141_372423_149 176641 177660 - 2.A.109.3.1
pfam k141_372423 k141_372423_150 177728 179119 - PTS_EIIA_2 | DAC | DacZ_P
TC k141_372423 k141_372423_151 179123 179509 - 3.D.1.2.1
TC k141_372423 k141_372423_152 179614 181827 + 2.A.16.2.2
pfam k141_372423 k141_372423_153 181883 182047 + Rubredoxin
pfam k141_372423 k141_372423_154 182051 183226 + Lactamase_B | Lactamase_B_2 | ODP
CAZyme k141_372423 k141_372423_155 183381 184853 - GH28
CAZyme k141_372423 k141_372423_156 185062 187089 - GH36
Gene ID: k141_372423_142
Type: TC
Location: 167783 - 169288 (-)
Gene ID: k141_372423_143
Type: STP
Location: 169292 - 170056 (-)
Gene ID: k141_372423_144
Type: TC
Location: 170233 - 171372 (-)
Gene ID: k141_372423_145
Type: pfam
Location: 171404 - 174274 (+)
Gene ID: k141_372423_146
Type: pfam
Location: 174326 - 175183 (+)
Gene ID: k141_372423_147
Type: TC
Location: 175193 - 175603 (+)
Gene ID: k141_372423_148
Type: pfam
Location: 175600 - 176445 (+)
Gene ID: k141_372423_149
Type: TC
Location: 176641 - 177660 (-)
Gene ID: k141_372423_150
Type: pfam
Location: 177728 - 179119 (-)
Gene ID: k141_372423_151
Type: TC
Location: 179123 - 179509 (-)
Gene ID: k141_372423_152
Type: TC
Location: 179614 - 181827 (+)
Gene ID: k141_372423_153
Type: pfam
Location: 181883 - 182047 (+)
Gene ID: k141_372423_154
Type: pfam
Location: 182051 - 183226 (+)
Gene ID: k141_372423_155
Type: CAZyme
Location: 183381 - 184853 (-)
Gene ID: k141_372423_156
Type: CAZyme
Location: 185062 - 187089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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