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Cluster: AG085_bin.79_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_288161 k141_288161_180 222184 222720 + CBM20
TF k141_288161 k141_288161_181 222764 223885 - LacI | LacI
pfam k141_288161 k141_288161_182 224075 225745 + Flg_new
CAZyme k141_288161 k141_288161_183 225808 227451 + CBM34 | GH13_20
pfam k141_288161 k141_288161_184 227456 228925 + SBP_bac_1 | SBP_bac_8
TC k141_288161 k141_288161_185 228940 230295 + 3.A.1.1.27
TC k141_288161 k141_288161_186 230295 231152 + 3.A.1.1.27
Gene ID: k141_288161_180
Type: CAZyme
Location: 222184 - 222720 (+)
Gene ID: k141_288161_181
Type: TF
Location: 222764 - 223885 (-)
Gene ID: k141_288161_182
Type: pfam
Location: 224075 - 225745 (+)
Gene ID: k141_288161_183
Type: CAZyme
Location: 225808 - 227451 (+)
Gene ID: k141_288161_184
Type: pfam
Location: 227456 - 228925 (+)
Gene ID: k141_288161_185
Type: TC
Location: 228940 - 230295 (+)
Gene ID: k141_288161_186
Type: TC
Location: 230295 - 231152 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_288161_180 vegetarian > omnivore 2.50761 0.00353
k141_288161_180 vegetarian > vegan 1.97383 0.00180

🧭 Explore Read Mapping of CGC

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