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Cluster: AG085_bin.79_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_202631 k141_202631_47 39592 40647 - CE15
TF k141_202631 k141_202631_48 40753 41586 + 0036286
NULL(UNKNOWN) k141_202631 k141_202631_49 41607 41876 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_202631 k141_202631_50 42567 44747 - GH36
TF k141_202631 k141_202631_51 45341 45703 - HTH_5
NULL(UNKNOWN) k141_202631 k141_202631_52 45826 45987 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_202631 k141_202631_53 46207 47724 - GH31_19
CAZyme k141_202631 k141_202631_54 47733 49712 - GH3
CAZyme k141_202631 k141_202631_55 49693 50871 - GH37
pfam k141_202631 k141_202631_56 50936 52447 - Big_2
pfam k141_202631 k141_202631_57 52486 54195 - Bmp
TC k141_202631 k141_202631_58 54200 55099 - 3.A.1.1.9
TC k141_202631 k141_202631_59 55111 56058 - 3.A.1.1.9
TC k141_202631 k141_202631_60 56061 57719 - 3.A.1.1.10
TF k141_202631 k141_202631_61 57909 59063 - HTH_AraC
TC k141_202631 k141_202631_62 59067 60776 - 9.B.33.1.1
NULL(UNKNOWN) k141_202631 k141_202631_63 61465 61605 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_202631 k141_202631_64 61746 62582 - PseudoU_synth_2
TC k141_202631 k141_202631_65 62521 64374 - 9.A.8.1.11
Gene ID: k141_202631_47
Type: CAZyme
Location: 39592 - 40647 (-)
Gene ID: k141_202631_48
Type: TF
Location: 40753 - 41586 (+)
Gene ID: k141_202631_49
Type:
Location: 41607 - 41876 (-)
Gene ID: k141_202631_50
Type: CAZyme
Location: 42567 - 44747 (-)
Gene ID: k141_202631_51
Type: TF
Location: 45341 - 45703 (-)
Gene ID: k141_202631_52
Type:
Location: 45826 - 45987 (+)
Gene ID: k141_202631_53
Type: CAZyme
Location: 46207 - 47724 (-)
Gene ID: k141_202631_54
Type: CAZyme
Location: 47733 - 49712 (-)
Gene ID: k141_202631_55
Type: CAZyme
Location: 49693 - 50871 (-)
Gene ID: k141_202631_56
Type: pfam
Location: 50936 - 52447 (-)
Gene ID: k141_202631_57
Type: pfam
Location: 52486 - 54195 (-)
Gene ID: k141_202631_58
Type: TC
Location: 54200 - 55099 (-)
Gene ID: k141_202631_59
Type: TC
Location: 55111 - 56058 (-)
Gene ID: k141_202631_60
Type: TC
Location: 56061 - 57719 (-)
Gene ID: k141_202631_61
Type: TF
Location: 57909 - 59063 (-)
Gene ID: k141_202631_62
Type: TC
Location: 59067 - 60776 (-)
Gene ID: k141_202631_63
Type:
Location: 61465 - 61605 (-)
Gene ID: k141_202631_64
Type: pfam
Location: 61746 - 62582 (-)
Gene ID: k141_202631_65
Type: TC
Location: 62521 - 64374 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_202631_53 vegetarian > vegan 1.60025 0.00180
k141_202631_53 vegetarian > omnivore 1.41927 0.00353
k141_202631_54 vegetarian > omnivore 1.26506 0.00353
k141_202631_54 vegetarian > vegan 1.60705 0.00180
k141_202631_55 vegetarian > omnivore 1.28963 0.00353
k141_202631_55 vegetarian > vegan 1.53292 0.00180
k141_202631_56 vegetarian > omnivore 1.29709 0.00353
k141_202631_56 vegetarian > vegan 1.47808 0.00180
k141_202631_57 vegetarian > omnivore 1.52151 0.00353
k141_202631_57 vegetarian > vegan 1.56956 0.00180
k141_202631_58 vegetarian > omnivore 1.41869 0.00353
k141_202631_58 vegetarian > vegan 1.58623 0.00180
k141_202631_59 vegetarian > omnivore 1.21509 0.00353
k141_202631_59 vegetarian > vegan 1.37823 0.00180
k141_202631_60 vegetarian > omnivore 1.29263 0.00353
k141_202631_60 vegetarian > vegan 1.42710 0.00180
k141_202631_61 vegetarian > vegan 1.45849 0.00180
k141_202631_61 vegetarian > omnivore 1.55339 0.00353
k141_202631_62 vegetarian > omnivore 1.30955 0.00353

🧭 Explore Read Mapping of CGC

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