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Cluster: AG085_bin.79_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_128246 k141_128246_147 175635 176609 - GH36
CAZyme k141_128246 k141_128246_148 176718 177761 - GH36
CAZyme k141_128246 k141_128246_149 177758 180196 - GH94
CAZyme k141_128246 k141_128246_150 180377 181729 + GH1
CAZyme k141_128246 k141_128246_151 181722 182546 - CE4
TC k141_128246 k141_128246_152 182701 183657 + 3.A.1.1.10
TC k141_128246 k141_128246_153 183670 184572 + 3.A.1.1.10
STP k141_128246 k141_128246_154 184620 186227 + SBP_bac_1
pfam k141_128246 k141_128246_155 186238 188091 + Glyco_hydro_42
CAZyme k141_128246 k141_128246_156 188095 188760 + CE4
Gene ID: k141_128246_147
Type: CAZyme
Location: 175635 - 176609 (-)
Gene ID: k141_128246_148
Type: CAZyme
Location: 176718 - 177761 (-)
Gene ID: k141_128246_149
Type: CAZyme
Location: 177758 - 180196 (-)
Gene ID: k141_128246_150
Type: CAZyme
Location: 180377 - 181729 (+)
Gene ID: k141_128246_151
Type: CAZyme
Location: 181722 - 182546 (-)
Gene ID: k141_128246_152
Type: TC
Location: 182701 - 183657 (+)
Gene ID: k141_128246_153
Type: TC
Location: 183670 - 184572 (+)
Gene ID: k141_128246_154
Type: STP
Location: 184620 - 186227 (+)
Gene ID: k141_128246_155
Type: pfam
Location: 186238 - 188091 (+)
Gene ID: k141_128246_156
Type: CAZyme
Location: 188095 - 188760 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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