Cluster: AG083_bin.61_CGC9
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG083_bin.61
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_396144 | k141_396144_9 | 20726 | 21970 | - | GT4 |
| pfam | k141_396144 | k141_396144_10 | 21984 | 22748 | - | BcrAD_BadFG |
| pfam | k141_396144 | k141_396144_11 | 22800 | 23963 | - | HGD-D |
| TC | k141_396144 | k141_396144_12 | 24041 | 24826 | - | 3.A.1.5.36 |
| TC | k141_396144 | k141_396144_13 | 24813 | 25811 | - | 3.A.1.5.35 |
| TC | k141_396144 | k141_396144_14 | 25815 | 26642 | - | 3.A.1.5.39 |
| TC | k141_396144 | k141_396144_15 | 26642 | 27595 | - | 3.A.1.5.11 |
| TC | k141_396144 | k141_396144_16 | 27682 | 29292 | - | 3.A.1.5.11 |
| pfam | k141_396144 | k141_396144_17 | 29477 | 30760 | - | HGD-D |
| TC | k141_396144 | k141_396144_18 | 31211 | 32281 | - | 3.A.1.1.3 |
| TC | k141_396144 | k141_396144_19 | 32285 | 33766 | - | 3.A.1.8.1 |
Gene ID: k141_396144_9
Type: CAZyme
Location: 20726 - 21970 (-)
Type: CAZyme
Location: 20726 - 21970 (-)
Gene ID: k141_396144_10
Type: pfam
Location: 21984 - 22748 (-)
Type: pfam
Location: 21984 - 22748 (-)
Gene ID: k141_396144_11
Type: pfam
Location: 22800 - 23963 (-)
Type: pfam
Location: 22800 - 23963 (-)
Gene ID: k141_396144_12
Type: TC
Location: 24041 - 24826 (-)
Type: TC
Location: 24041 - 24826 (-)
Gene ID: k141_396144_13
Type: TC
Location: 24813 - 25811 (-)
Type: TC
Location: 24813 - 25811 (-)
Gene ID: k141_396144_14
Type: TC
Location: 25815 - 26642 (-)
Type: TC
Location: 25815 - 26642 (-)
Gene ID: k141_396144_15
Type: TC
Location: 26642 - 27595 (-)
Type: TC
Location: 26642 - 27595 (-)
Gene ID: k141_396144_16
Type: TC
Location: 27682 - 29292 (-)
Type: TC
Location: 27682 - 29292 (-)
Gene ID: k141_396144_17
Type: pfam
Location: 29477 - 30760 (-)
Type: pfam
Location: 29477 - 30760 (-)
Gene ID: k141_396144_18
Type: TC
Location: 31211 - 32281 (-)
Type: TC
Location: 31211 - 32281 (-)
Gene ID: k141_396144_19
Type: TC
Location: 32285 - 33766 (-)
Type: TC
Location: 32285 - 33766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_396144_12 | vegan > omnivore | 2.65338 | 0.00701 |
| k141_396144_13 | vegan > omnivore | 1.49482 | 0.00701 |
| k141_396144_14 | vegan > omnivore | 2.85897 | 0.00701 |
| k141_396144_15 | vegan > omnivore | 2.58238 | 0.00701 |
| k141_396144_16 | vegan > omnivore | 2.94838 | 0.00701 |