Cluster: AG079_bin.72_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: AG079_bin.72
- CGC Family ID: CGCFAM_00014
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_193543 | k141_193543_2 | 331 | 2091 | + | 4.A.3.1.1 |
| TF | k141_193543 | k141_193543_3 | 2268 | 3278 | - | LacI |
| TC | k141_193543 | k141_193543_4 | 3554 | 5332 | + | 4.A.3.1.1 |
| CAZyme | k141_193543 | k141_193543_5 | 5408 | 6829 | + | GH1 |
| pfam | k141_193543 | k141_193543_6 | 7195 | 8427 | + | Fic |
| STP | k141_193543 | k141_193543_7 | 8465 | 8806 | - | DeoRC |
| TC | k141_193543 | k141_193543_8 | 8969 | 10663 | - | 4.A.3.1.1 |
Gene ID: k141_193543_2
Type: TC
Location: 331 - 2091 (+)
Type: TC
Location: 331 - 2091 (+)
Gene ID: k141_193543_3
Type: TF
Location: 2268 - 3278 (-)
Type: TF
Location: 2268 - 3278 (-)
Gene ID: k141_193543_4
Type: TC
Location: 3554 - 5332 (+)
Type: TC
Location: 3554 - 5332 (+)
Gene ID: k141_193543_5
Type: CAZyme
Location: 5408 - 6829 (+)
Type: CAZyme
Location: 5408 - 6829 (+)
Gene ID: k141_193543_6
Type: pfam
Location: 7195 - 8427 (+)
Type: pfam
Location: 7195 - 8427 (+)
Gene ID: k141_193543_7
Type: STP
Location: 8465 - 8806 (-)
Type: STP
Location: 8465 - 8806 (-)
Gene ID: k141_193543_8
Type: TC
Location: 8969 - 10663 (-)
Type: TC
Location: 8969 - 10663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_193543_7 | vegetarian > omnivore | 1.00570 | 0.02391 |