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Cluster: AG078_38_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_161470 k141_161470_23 26420 28987 - GH78
pfam k141_161470 k141_161470_24 29313 29582 - Ribosomal_S15
CAZyme k141_161470 k141_161470_25 29889 32138 + GH3
CAZyme k141_161470 k141_161470_26 32263 34548 - GH3
STP k141_161470 k141_161470_27 34674 37580 - Sigma70_r4_2 | Y_Y_Y
TC k141_161470 k141_161470_28 38500 41619 + 1.B.14.6.1
TC k141_161470 k141_161470_29 41665 43302 + 8.A.46.1.3
NULL(UNKNOWN) k141_161470 k141_161470_30 43507 44388 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_161470 k141_161470_31 44662 46221 + GH128
CAZyme k141_161470 k141_161470_32 46436 49537 + GH16_3
Gene ID: k141_161470_23
Type: CAZyme
Location: 26420 - 28987 (-)
Gene ID: k141_161470_24
Type: pfam
Location: 29313 - 29582 (-)
Gene ID: k141_161470_25
Type: CAZyme
Location: 29889 - 32138 (+)
Gene ID: k141_161470_26
Type: CAZyme
Location: 32263 - 34548 (-)
Gene ID: k141_161470_27
Type: STP
Location: 34674 - 37580 (-)
Gene ID: k141_161470_28
Type: TC
Location: 38500 - 41619 (+)
Gene ID: k141_161470_29
Type: TC
Location: 41665 - 43302 (+)
Gene ID: k141_161470_30
Type:
Location: 43507 - 44388 (+)
Gene ID: k141_161470_31
Type: CAZyme
Location: 44662 - 46221 (+)
Gene ID: k141_161470_32
Type: CAZyme
Location: 46436 - 49537 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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