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Cluster: AG078_38_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18964 k141_18964_66 81989 83890 - GH13_46
CAZyme k141_18964 k141_18964_67 84055 86022 - GH13_14
CAZyme k141_18964 k141_18964_68 86199 88874 - CBM20 | GH77
TC k141_18964 k141_18964_69 88986 90302 - 2.A.2.6.2
TF k141_18964 k141_18964_70 90567 91619 - LacI
TC k141_18964 k141_18964_71 91951 95037 + 1.B.14.6.1
TC k141_18964 k141_18964_72 95080 96693 + 8.A.46.1.1
pfam k141_18964 k141_18964_73 96724 97986 + SusE
NULL(UNKNOWN) k141_18964 k141_18964_74 98045 99469 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_18964 k141_18964_75 99646 100947 + GH53
CAZyme k141_18964 k141_18964_76 101079 103106 + GH13_7
Gene ID: k141_18964_66
Type: CAZyme
Location: 81989 - 83890 (-)
Gene ID: k141_18964_67
Type: CAZyme
Location: 84055 - 86022 (-)
Gene ID: k141_18964_68
Type: CAZyme
Location: 86199 - 88874 (-)
Gene ID: k141_18964_69
Type: TC
Location: 88986 - 90302 (-)
Gene ID: k141_18964_70
Type: TF
Location: 90567 - 91619 (-)
Gene ID: k141_18964_71
Type: TC
Location: 91951 - 95037 (+)
Gene ID: k141_18964_72
Type: TC
Location: 95080 - 96693 (+)
Gene ID: k141_18964_73
Type: pfam
Location: 96724 - 97986 (+)
Gene ID: k141_18964_74
Type:
Location: 98045 - 99469 (+)
Gene ID: k141_18964_75
Type: CAZyme
Location: 99646 - 100947 (+)
Gene ID: k141_18964_76
Type: CAZyme
Location: 101079 - 103106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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