dbCAN Logo

Cluster: AG078_38_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18964 k141_18964_28 37536 38900 + CBM50
pfam k141_18964 k141_18964_29 38924 39757 + OMP_b-brl_2
TC k141_18964 k141_18964_30 39905 41428 + 2.A.17.1.6
TC k141_18964 k141_18964_31 41879 43195 + 2.A.1.10.1
pfam k141_18964 k141_18964_32 43312 44031 + Methyltrans_RNA | PUA_4
pfam k141_18964 k141_18964_33 44082 45446 + DUF4836
TC k141_18964 k141_18964_34 45515 46159 + 3.A.1.10.3
Gene ID: k141_18964_28
Type: CAZyme
Location: 37536 - 38900 (+)
Gene ID: k141_18964_29
Type: pfam
Location: 38924 - 39757 (+)
Gene ID: k141_18964_30
Type: TC
Location: 39905 - 41428 (+)
Gene ID: k141_18964_31
Type: TC
Location: 41879 - 43195 (+)
Gene ID: k141_18964_32
Type: pfam
Location: 43312 - 44031 (+)
Gene ID: k141_18964_33
Type: pfam
Location: 44082 - 45446 (+)
Gene ID: k141_18964_34
Type: TC
Location: 45515 - 46159 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List