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Cluster: AG078_38_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_33266 k141_33266_24 32172 33395 + GT2
pfam k141_33266 k141_33266_25 33392 33910 + Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4
TC k141_33266 k141_33266_26 34436 35920 - 8.A.46.3.2
TC k141_33266 k141_33266_27 35998 39153 - 1.B.14.6.1
STP k141_33266 k141_33266_28 39753 42293 + AAA
pfam k141_33266 k141_33266_29 42300 43433 + TGT
TC k141_33266 k141_33266_30 43785 45035 + 1.B.42.1.13
TC k141_33266 k141_33266_31 45175 47043 + 3.A.18.1.1
pfam k141_33266 k141_33266_32 47493 48821 + AAA_14 | DUF4143
pfam k141_33266 k141_33266_33 49051 49860 + CBM26
CAZyme k141_33266 k141_33266_34 49900 52110 + GH13_28
Gene ID: k141_33266_24
Type: CAZyme
Location: 32172 - 33395 (+)
Gene ID: k141_33266_25
Type: pfam
Location: 33392 - 33910 (+)
Gene ID: k141_33266_26
Type: TC
Location: 34436 - 35920 (-)
Gene ID: k141_33266_27
Type: TC
Location: 35998 - 39153 (-)
Gene ID: k141_33266_28
Type: STP
Location: 39753 - 42293 (+)
Gene ID: k141_33266_29
Type: pfam
Location: 42300 - 43433 (+)
Gene ID: k141_33266_30
Type: TC
Location: 43785 - 45035 (+)
Gene ID: k141_33266_31
Type: TC
Location: 45175 - 47043 (+)
Gene ID: k141_33266_32
Type: pfam
Location: 47493 - 48821 (+)
Gene ID: k141_33266_33
Type: pfam
Location: 49051 - 49860 (+)
Gene ID: k141_33266_34
Type: CAZyme
Location: 49900 - 52110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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