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Cluster: AG078_38_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22002 k141_22002_11 13924 15087 - GH76
pfam k141_22002 k141_22002_12 15175 16335 - SusE
TC k141_22002 k141_22002_13 16378 17970 - 8.A.46.1.3
TC k141_22002 k141_22002_14 18013 21180 - 1.B.14.6.1
pfam k141_22002 k141_22002_15 21656 22198 - Metallophos | Metallophos_2
TC k141_22002 k141_22002_16 22199 23056 - 1.B.42.1.2
TC k141_22002 k141_22002_17 23337 24083 + 3.A.1.27.1
TC k141_22002 k141_22002_18 24279 25049 + 3.A.1.27.4
pfam k141_22002 k141_22002_19 25228 26238 + Semialdhyde_dh | Semialdhyde_dhC
NULL(UNKNOWN) k141_22002 k141_22002_20 26386 26784 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_22002 k141_22002_21 28023 31172 - GH13_42
Gene ID: k141_22002_11
Type: CAZyme
Location: 13924 - 15087 (-)
Gene ID: k141_22002_12
Type: pfam
Location: 15175 - 16335 (-)
Gene ID: k141_22002_13
Type: TC
Location: 16378 - 17970 (-)
Gene ID: k141_22002_14
Type: TC
Location: 18013 - 21180 (-)
Gene ID: k141_22002_15
Type: pfam
Location: 21656 - 22198 (-)
Gene ID: k141_22002_16
Type: TC
Location: 22199 - 23056 (-)
Gene ID: k141_22002_17
Type: TC
Location: 23337 - 24083 (+)
Gene ID: k141_22002_18
Type: TC
Location: 24279 - 25049 (+)
Gene ID: k141_22002_19
Type: pfam
Location: 25228 - 26238 (+)
Gene ID: k141_22002_20
Type:
Location: 26386 - 26784 (-)
Gene ID: k141_22002_21
Type: CAZyme
Location: 28023 - 31172 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_22002_21 vegetarian > omnivore 1.33370 0.03419

🧭 Explore Read Mapping of CGC

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