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Cluster: AG078_38_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13287 k141_13287_18 26541 28019 + 2.A.35.1.6
NULL(UNKNOWN) k141_13287 k141_13287_19 28700 29014 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_13287 k141_13287_20 29061 30383 + UDPG_MGDP_dh | 3HCDH_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_13287 k141_13287_21 30833 32032 + 2.A.40.1.4
pfam k141_13287 k141_13287_22 32107 32859 + DUF5020
TC k141_13287 k141_13287_23 32957 34255 + 2.A.40.7.4
pfam k141_13287 k141_13287_24 34355 35731 + MatE | MatE
CAZyme k141_13287 k141_13287_25 35850 38213 - GH92
NULL(UNKNOWN) k141_13287 k141_13287_26 38228 39982 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_13287 k141_13287_27 40193 41068 + HTH_AraC | HTH_AraC
TC k141_13287 k141_13287_28 41989 42849 + 3.A.1.132.6
Gene ID: k141_13287_18
Type: TC
Location: 26541 - 28019 (+)
Gene ID: k141_13287_19
Type:
Location: 28700 - 29014 (-)
Gene ID: k141_13287_20
Type: pfam
Location: 29061 - 30383 (+)
Gene ID: k141_13287_21
Type: TC
Location: 30833 - 32032 (+)
Gene ID: k141_13287_22
Type: pfam
Location: 32107 - 32859 (+)
Gene ID: k141_13287_23
Type: TC
Location: 32957 - 34255 (+)
Gene ID: k141_13287_24
Type: pfam
Location: 34355 - 35731 (+)
Gene ID: k141_13287_25
Type: CAZyme
Location: 35850 - 38213 (-)
Gene ID: k141_13287_26
Type:
Location: 38228 - 39982 (-)
Gene ID: k141_13287_27
Type: TF
Location: 40193 - 41068 (+)
Gene ID: k141_13287_28
Type: TC
Location: 41989 - 42849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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