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Cluster: AG077_bin.20_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1711 k141_1711_2 1547 2968 - GH1
TC k141_1711 k141_1711_3 3045 4823 - 4.A.3.1.1
TF k141_1711 k141_1711_4 5099 6109 + LacI
TC k141_1711 k141_1711_5 6444 8204 - 4.A.3.1.1
CAZyme k141_1711 k141_1711_6 8381 9823 - GH1
TF k141_1711 k141_1711_7 10165 11202 + LacI
CAZyme k141_1711 k141_1711_8 11464 12903 - GH1
TC k141_1711 k141_1711_9 12970 14745 - 4.A.3.1.1
TF k141_1711 k141_1711_10 15103 16107 + LacI
TC k141_1711 k141_1711_11 16322 16660 + 4.A.3.1.2
Gene ID: k141_1711_2
Type: CAZyme
Location: 1547 - 2968 (-)
Gene ID: k141_1711_3
Type: TC
Location: 3045 - 4823 (-)
Gene ID: k141_1711_4
Type: TF
Location: 5099 - 6109 (+)
Gene ID: k141_1711_5
Type: TC
Location: 6444 - 8204 (-)
Gene ID: k141_1711_6
Type: CAZyme
Location: 8381 - 9823 (-)
Gene ID: k141_1711_7
Type: TF
Location: 10165 - 11202 (+)
Gene ID: k141_1711_8
Type: CAZyme
Location: 11464 - 12903 (-)
Gene ID: k141_1711_9
Type: TC
Location: 12970 - 14745 (-)
Gene ID: k141_1711_10
Type: TF
Location: 15103 - 16107 (+)
Gene ID: k141_1711_11
Type: TC
Location: 16322 - 16660 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1711_7 vegetarian > omnivore 1.08537 0.01867

🧭 Explore Read Mapping of CGC

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