Cluster: AG071_bin.6_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: AG071_bin.6
- CGC Family ID: CGCFAM_00019
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76202 | k141_76202_33 | 45070 | 46446 | - | 3.A.1.17.10 |
| NULL(UNKNOWN) | k141_76202 | k141_76202_34 | 46450 | 47484 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_76202 | k141_76202_35 | 47487 | 49298 | - | 3.D.1.5.1 |
| STP | k141_76202 | k141_76202_36 | 49292 | 51124 | - | Pyr_redox_2 |
| CAZyme | k141_76202 | k141_76202_37 | 51397 | 52779 | - | GH4 |
| TC | k141_76202 | k141_76202_38 | 52783 | 54399 | - | 4.A.1.1.3 |
| pfam | k141_76202 | k141_76202_39 | 54499 | 55353 | - | PRD | PRD | CAT_RBD |
| TC | k141_76202 | k141_76202_40 | 55372 | 55884 | - | 4.A.1.2.5 |
| STP | k141_76202 | k141_76202_41 | 56164 | 56925 | - | Fer4 |
| TC | k141_76202 | k141_76202_42 | 57544 | 59793 | - | 1.I.1.1.3 |
| STP | k141_76202 | k141_76202_43 | 60292 | 61254 | + | FHA |
| STP | k141_76202 | k141_76202_44 | 61426 | 63510 | + | Pkinase |
| TC | k141_76202 | k141_76202_45 | 63840 | 66182 | + | 3.A.3.5.15 |
Gene ID: k141_76202_33
Type: TC
Location: 45070 - 46446 (-)
Type: TC
Location: 45070 - 46446 (-)
Gene ID: k141_76202_34
Type:
Location: 46450 - 47484 (-)
Type:
Location: 46450 - 47484 (-)
Gene ID: k141_76202_35
Type: TC
Location: 47487 - 49298 (-)
Type: TC
Location: 47487 - 49298 (-)
Gene ID: k141_76202_36
Type: STP
Location: 49292 - 51124 (-)
Type: STP
Location: 49292 - 51124 (-)
Gene ID: k141_76202_37
Type: CAZyme
Location: 51397 - 52779 (-)
Type: CAZyme
Location: 51397 - 52779 (-)
Gene ID: k141_76202_38
Type: TC
Location: 52783 - 54399 (-)
Type: TC
Location: 52783 - 54399 (-)
Gene ID: k141_76202_39
Type: pfam
Location: 54499 - 55353 (-)
Type: pfam
Location: 54499 - 55353 (-)
Gene ID: k141_76202_40
Type: TC
Location: 55372 - 55884 (-)
Type: TC
Location: 55372 - 55884 (-)
Gene ID: k141_76202_41
Type: STP
Location: 56164 - 56925 (-)
Type: STP
Location: 56164 - 56925 (-)
Gene ID: k141_76202_42
Type: TC
Location: 57544 - 59793 (-)
Type: TC
Location: 57544 - 59793 (-)
Gene ID: k141_76202_43
Type: STP
Location: 60292 - 61254 (+)
Type: STP
Location: 60292 - 61254 (+)
Gene ID: k141_76202_44
Type: STP
Location: 61426 - 63510 (+)
Type: STP
Location: 61426 - 63510 (+)
Gene ID: k141_76202_45
Type: TC
Location: 63840 - 66182 (+)
Type: TC
Location: 63840 - 66182 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.