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Cluster: AG071_bin.6_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_240179 k141_240179_6 3967 5343 - GH13_20
TC k141_240179 k141_240179_7 5527 6723 - 2.A.1.2.18
TC k141_240179 k141_240179_8 6845 9205 - 9.A.8.1.6
pfam k141_240179 k141_240179_9 9557 10678 + DEDD_Tnp_IS110 | Transposase_20
peptidase k141_240179 k141_240179_10 11148 12050 - S09.UPW
TC k141_240179 k141_240179_11 12296 12859 + 4.A.1.2.6
pfam k141_240179 k141_240179_12 13041 14444 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) k141_240179 k141_240179_13 14695 15480 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_240179 k141_240179_14 15641 16621 + 3.A.1.34.1
TC k141_240179 k141_240179_15 16826 17749 + 3.A.1.34.1
TC k141_240179 k141_240179_16 17742 18536 + 3.A.1.34.1
Gene ID: k141_240179_6
Type: CAZyme
Location: 3967 - 5343 (-)
Gene ID: k141_240179_7
Type: TC
Location: 5527 - 6723 (-)
Gene ID: k141_240179_8
Type: TC
Location: 6845 - 9205 (-)
Gene ID: k141_240179_9
Type: pfam
Location: 9557 - 10678 (+)
Gene ID: k141_240179_10
Type: peptidase
Location: 11148 - 12050 (-)
Gene ID: k141_240179_11
Type: TC
Location: 12296 - 12859 (+)
Gene ID: k141_240179_12
Type: pfam
Location: 13041 - 14444 (+)
Gene ID: k141_240179_13
Type:
Location: 14695 - 15480 (+)
Gene ID: k141_240179_14
Type: TC
Location: 15641 - 16621 (+)
Gene ID: k141_240179_15
Type: TC
Location: 16826 - 17749 (+)
Gene ID: k141_240179_16
Type: TC
Location: 17742 - 18536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_240179_9 vegan > omnivore 1.57780 0.01287

🧭 Explore Read Mapping of CGC

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