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Cluster: AG066_64_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_22357 k141_22357_1 1 537 + 9.B.18.1.2
pfam k141_22357 k141_22357_2 576 1835 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_22357 k141_22357_3 1839 2312 + Alg14
CAZyme k141_22357 k141_22357_4 2325 2816 + GT1
pfam k141_22357 k141_22357_5 2813 3703 + ATPgrasp_TupA
CAZyme k141_22357 k141_22357_6 3951 5054 + GT4
NULL(UNKNOWN) k141_22357 k141_22357_7 5051 5545 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_22357 k141_22357_8 5559 6482 + GT2
Gene ID: k141_22357_1
Type: TC
Location: 1 - 537 (+)
Gene ID: k141_22357_2
Type: pfam
Location: 576 - 1835 (+)
Gene ID: k141_22357_3
Type: pfam
Location: 1839 - 2312 (+)
Gene ID: k141_22357_4
Type: CAZyme
Location: 2325 - 2816 (+)
Gene ID: k141_22357_5
Type: pfam
Location: 2813 - 3703 (+)
Gene ID: k141_22357_6
Type: CAZyme
Location: 3951 - 5054 (+)
Gene ID: k141_22357_7
Type:
Location: 5051 - 5545 (+)
Gene ID: k141_22357_8
Type: CAZyme
Location: 5559 - 6482 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_22357_2 vegan > omnivore 1.02552 0.01560

🧭 Explore Read Mapping of CGC

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